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PLM3-1_170_b2_sep16_scaffold_38895

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_38895_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(440..772)
DNA (333bp) protein (111aa)
30S ribosomal protein S25e Tax=Candidatus Nitrososphaera gargensis RepID=K0IKT6_NITGG
rps25e; 30S ribosomal protein S25
R-protein S25e {ECO:0000313|EMBL:ADK25954.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_170_b2_sep16_scaffold_38895_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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919..1392
DNA (474bp) protein (158aa)
ATP-dependent DNA ligase I (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR2_NITGG
PLM3-1_170_b2_sep16_scaffold_38895_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1352..2644
DNA (1293bp) protein (431aa)
lig; DNA ligase (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR2_NITGG
PLM3-1_170_b2_sep16_scaffold_38895_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2687..3499)
DNA (813bp) protein (271aa)
Transcription initiation factor IIB Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP6_NITGG
tfb6; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58463.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 4 items

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