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PLM3-1_170_b2_sep16_scaffold_3107

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3107_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161..1051
DNA (891bp) protein (297aa)
Protease HtpX homolog bin=GWD2_Deltaproteobacteria_55_8 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M28
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_3107_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1100..1639
DNA (540bp) protein (180aa)
id=2116211 bin=GWD2_Deltaproteobacteria_55_8 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1682..2062)
DNA (381bp) protein (127aa)
L-PSP (MRNA) endoribonuclease bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
translation initiation inhibitor
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3107_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2201..2389
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_3107_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2402..2683
DNA (282bp) protein (94aa)
HNH endonuclease family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
HNH endonuclease family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3107_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2741..3475
DNA (735bp) protein (245aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_7
unknown

Not on your lists

3557..4096
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3107_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4481..4687)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Kushneria aurantia RepID=UPI00037FFE5A
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_3107_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4841..5953
DNA (1113bp) protein (371aa)
Peptidase M24 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z7_VARPS
peptidase M24
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_3107_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5960..7117
DNA (1158bp) protein (386aa)
Muconate cycloisomerase Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FP4_MESSB
mandelate racemase/muconate lactonizing-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_3107_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7273..8238
DNA (966bp) protein (322aa)
NAD/NADP octopine/nopaline dehydrogenase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWR1_HALOH
NAD/NADP octopine/nopaline dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_3107_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8196..8372
DNA (177bp) protein (59aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036640A5
glycerol-3-phosphate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8385..9368
DNA (984bp) protein (328aa)
coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin (EC:1.5.99.11)
Methylenetetrahydromethanopterin reductase Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRP3_RHOP2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_3107_14
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9443..9850
DNA (408bp) protein (136aa)
Extracellular solute-binding protein family 1 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3107_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9814..10554
DNA (741bp) protein (247aa)
Extracellular solute-binding protein family 1 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_3107_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10639..11661
DNA (1023bp) protein (341aa)
Extracellular solute-binding protein family 1 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_3107_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11922..13673
DNA (1752bp) protein (584aa)
hypothetical protein Tax=Pseudomonas agarici RepID=UPI00037029A0
putative iron(III)-transport system permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13969..14952
DNA (984bp) protein (328aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15366..16553
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000377F599
peptidase M20
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_20
unknown

Not on your lists

16688..16807
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3107_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16889..17662)
DNA (774bp) protein (258aa)
glyoxalase family protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_3107_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17759..18214)
DNA (456bp) protein (152aa)
luciferase-like protein bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 22 items

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