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PLM3-1_170_b2_sep16_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_101_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1636)
-----------------
DNA (1635bp)
protein (545aa)
1A family penicillin-binding protein (EC:2.4.1.129)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YBB8_9DELT
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_101_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1903..3399)
-----------------
DNA (1497bp)
protein (499aa)
Serine protease do-like (EC:3.4.21.-)
Putative Serine protease do-like bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3409..3840)
-----------------
DNA (432bp)
protein (144aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4010..5119)
-----------------
DNA (1110bp)
protein (370aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family glycosyltransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_101_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5221..6174
-----------------
DNA (954bp)
protein (318aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_101_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6150..6962
-----------------
DNA (813bp)
protein (271aa)
Adenosine nucleotide alpha-hydrolase superfamily protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
potassium ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_101_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6959..7657)
-----------------
DNA (699bp)
protein (233aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase/2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_101_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8212)
-----------------
DNA (483bp)
protein (161aa)
Transcriptional regulator, CarD domain protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CarD family transcriptional regulator CdnL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8602..9039)
-----------------
DNA (438bp)
protein (146aa)
ribosomal protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_101_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9137..10594)
-----------------
DNA (1458bp)
protein (486aa)
id=1993804 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10687..10908
-----------------
DNA (222bp)
protein (74aa)
id=1773287 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_101_trna_1
unknown

Not on your lists

10706..10778
-----------------
DNA (73bp)
transferRNA Cys
PLM3-1_170_b2_sep16_scaffold_101_12
unknown

Not on your lists

comp(10950..11255)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_13
unknown

Not on your lists

comp(11421..12182)
-----------------
DNA (762bp)
protein (254aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_14
unknown

Not on your lists

comp(12186..12677)
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_15
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13066..14244
-----------------
DNA (1179bp)
protein (393aa)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM3-1_170_b2_sep16_scaffold_101_16

Not on your lists

comp(14292..14717)
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL66567.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b2_sep16_scaffold_101_17
unknown

Not on your lists

15183..15278
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_18
unknown

Not on your lists

comp(15367..15513)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_19
unknown

Not on your lists

16111..16338
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_20
unknown

Not on your lists

16343..16537
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_21
unknown

Not on your lists

16710..17057
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_101_22
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

17233..17997
-----------------
DNA (765bp)
protein (255aa)
Uncharacterized protein Tax=Serratia marcescens subsp. marcescens Db11 RepID=V5ZWQ6_SERMA
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
PLM3-1_170_b2_sep16_scaffold_101_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(18324..18932)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b2_sep16_scaffold_101_24
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19120..19383)
-----------------
DNA (264bp)
protein (88aa)
Glutaredoxin, GrxC bin=GWD2_Deltaproteobacteria_55_8 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutaredoxin, GrxC family
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19730..20338
-----------------
DNA (609bp)
protein (203aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_101_26
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20387..20947)
-----------------
DNA (561bp)
protein (187aa)
Elongation factor P bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
translation elongation factor P (EF-P)
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_101_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21152..22411)
-----------------
DNA (1260bp)
protein (420aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_101_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22513..22857)
-----------------
DNA (345bp)
protein (115aa)
Histidine triad (HIT) protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
histidine triad (HIT) protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_101_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22878..23165)
-----------------
DNA (288bp)
protein (96aa)
Rieske (2Fe-2S) domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying items 1-30 of 48 in total

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