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PLM3-1_170_b2_sep16_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_247_1
unknown

Not on your lists

3..239
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_247_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(276..1175)
DNA (900bp) protein (300aa)
Putative dehydrogenase protein bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSL12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_247_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1352..2311
DNA (960bp) protein (320aa)
Putative secreted protein bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_170_b2_sep16_scaffold_247_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2317..2757
DNA (441bp) protein (147aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Streptomyces bingchenggensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b2_sep16_scaffold_247_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2980..4491
DNA (1512bp) protein (504aa)
Tricarboxylate transport membrane protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_247_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4488..5459
DNA (972bp) protein (324aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MVJ6_9THEO
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_247_7
unknown

Not on your lists

6303..6680
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_247_8
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7144..7551)
DNA (408bp) protein (136aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=uncultured alpha proteobacterium HF0130_06E21 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Syntrophus_56_31_curated
PLM3-1_170_b2_sep16_scaffold_247_9
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7877..8302
DNA (426bp) protein (142aa)
Cupin domain-containing protein Tax=Streptomyces sp. e14 RepID=D6KG27_9ACTO
Cupin domain-containing protein {ECO:0000313|EMBL:EFF88507.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
cupin
PLM3-1_170_b2_sep16_scaffold_247_10

Not on your lists

8603..8974
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Desulfobacter postgatei 2ac9 RepID=I5B1N7_9DELT
Marine sediment metagenome DNA, contig: S12H4_S04057 {ECO:0000313|EMBL:GAI99067.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_247_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9039..10115
DNA (1077bp) protein (359aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI000361554F
Putative malate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3-1_170_b2_sep16_scaffold_247_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10366..10569
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_247_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..11706)
DNA (663bp) protein (221aa)
Uncharacterized conserved protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b2_sep16_scaffold_247_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11918..12586
DNA (669bp) protein (223aa)
hypothetical protein bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3-1_170_b2_sep16_scaffold_247_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12942..14873
DNA (1932bp) protein (644aa)
Xaa-Pro dipeptidyl-peptidase, peptidase family S15 (EC:3.4.14.11)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_247_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15098..16123
DNA (1026bp) protein (342aa)
Putative cobalamin-independent methionine synthase II Tax=uncultured bacterium RepID=A3RGY4_9BACT
Putative 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (Cobalamin-independent methionine synthase)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3-1_170_b2_sep16_scaffold_247_17
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16221..16979)
DNA (759bp) protein (253aa)
ABC transporter substrate-binding protein Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AX22_CLOA9
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
PLM3-1_170_b2_sep16_scaffold_247_18
unknown

Not on your lists

comp(17058..17210)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_247_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17284..17436)
DNA (153bp) protein (51aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_247_20
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17935..18186)
DNA (252bp) protein (84aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI0002EC512D
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b2_sep16_scaffold_247_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18581..19573)
DNA (993bp) protein (331aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_247_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19626..20069)
DNA (444bp) protein (148aa)
ABC transporter related Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GH16_METPE
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3-1_170_b2_sep16_scaffold_247_trna_1
unknown

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comp(20350..20440)
DNA (91bp)
transferRNA SeC(p)
PLM3-1_170_b2_sep16_scaffold_247_23
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20589..23513)
DNA (2925bp) protein (975aa)
maltooligosyl trehalose synthase (EC:5.4.99.15)
Malto-oligosyltrehalose synthase Tax=Oscillochloris trichoides DG-6 RepID=E1IFD1_9CHLR
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:EFO80101.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
PLM3-1_170_b2_sep16_scaffold_247_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(23571..25994)
DNA (2424bp) protein (808aa)
glycoside hydrolase protein bin=bin1_lowGC species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glycoside hydrolase family protein
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b2_sep16_scaffold_247_25
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(26018..27916)
DNA (1899bp) protein (633aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIF3_DESK7
Tax=RBG_16_Chloroflexi_50_9_curated
PLM3-1_170_b2_sep16_scaffold_247_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(28112..29353)
DNA (1242bp) protein (414aa)
glgC; glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (EC:2.7.7.27) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
glgC; glucose-1-phosphate adenylyltransferase (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (EC:2.7.7.27)
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_247_27
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(29378..30817)
DNA (1440bp) protein (480aa)
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_13_Chloroflexi_53_26_curated
PLM3-1_170_b2_sep16_scaffold_247_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(31032..32948)
DNA (1917bp) protein (639aa)
1,4-alpha-glucan-branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_247_29
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(32952..35066)
DNA (2115bp) protein (705aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
4-alpha-glucanotransferase (EC:2.4.1.25)
Tax=CSP1_5_NC10
Displaying items 1-30 of 32 in total

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