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PLM3-1_170_b2_sep16_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_281_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..360)
DNA (360bp) protein (120aa)
Peptidoglycan transglycosylase and transpeptidase FtsI bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
penicillin-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_281_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384..728)
DNA (345bp) protein (115aa)
Cell division protein FtsL bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_281_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(739..1668)
DNA (930bp) protein (310aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_281_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1669..2031)
DNA (363bp) protein (121aa)
Stage II sporulation protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
anti-anti-sigma factor
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_281_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2083..2535)
DNA (453bp) protein (151aa)
Protein MraZ bin=GWD2_Deltaproteobacteria_55_8 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
mraZ; cell division protein MraZ
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_281_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3228..3668)
DNA (441bp) protein (147aa)
Ribonuclease H bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ribonuclease H
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_281_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3834..4562)
DNA (729bp) protein (243aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_281_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4853..5998)
DNA (1146bp) protein (382aa)
Peptidase M48, Ste24p bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M48 Ste24p
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_281_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6100..7497)
DNA (1398bp) protein (466aa)
Putative FAD binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD linked oxidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_281_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7517..8842)
DNA (1326bp) protein (442aa)
Magnesium transporter Tax=Anaeromyxobacter RepID=B4UGH7_ANASK bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
magnesium transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_281_11
unknown

Not on your lists

comp(8967..9443)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_281_12
unknown

Not on your lists

9995..10195
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_281_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10601..10924
DNA (324bp) protein (108aa)
XRE family transcriptional regulator bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative HTH-type transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b2_sep16_scaffold_281_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11664..11984)
DNA (321bp) protein (107aa)
id=14431421 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_281_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12420..12734)
DNA (315bp) protein (105aa)
Amidohydrolase 3 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V834_SPHWW
amidohydrolase 3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_281_16
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(12887..13159)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SWT5_META2
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
PLM3-1_170_b2_sep16_scaffold_281_17
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13275..13439)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 6406 RepID=L8LAH4_9CYAN
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3-1_170_b2_sep16_scaffold_281_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13857..14723
DNA (867bp) protein (289aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Haloferax elongans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protein of unknown function DUF6 transmembrane
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_281_19
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(14904..16574)
DNA (1671bp) protein (557aa)
Uncharacterized protein bin=GWF2_OP3_38_59 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
PLM3-1_170_b2_sep16_scaffold_281_20
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(16571..17470)
DNA (900bp) protein (300aa)
ABC transporter-related protein bin=GWF2_OP3_38_59 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
ABC transporter
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
PLM3-1_170_b2_sep16_scaffold_281_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17467..17856)
DNA (390bp) protein (130aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037EAE01
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_281_22
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17949..18656)
DNA (708bp) protein (236aa)
Rhomboid family protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
rhomboid family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_281_23
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18876..19577)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_281_24
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19564..20349)
DNA (786bp) protein (262aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Y3_CALAS
putative branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_281_25
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20351..21598)
DNA (1248bp) protein (416aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=bin3_NC10 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
inner-membrane translocator
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_281_26
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21595..22563)
DNA (969bp) protein (323aa)
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein bin=bin3_NC10 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
branched-chain amino acid ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_281_27
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22752..24269
DNA (1518bp) protein (506aa)
AsmA family protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
AsmA family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_281_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(24403..24900)
DNA (498bp) protein (166aa)
ribonuclease BN; K07058 membrane protein bin=bin3_NC10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ribonuclease BN
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_281_29
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(24897..25676)
DNA (780bp) protein (260aa)
ribonuclease BN; K07058 membrane protein bin=bin3_NC10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ribonuclease BN
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_281_30
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(26186..27481)
DNA (1296bp) protein (432aa)
TPR domain protein Tax=Geobacter sulfurreducens RepID=D7AIP3_GEOSK
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
Displaying items 1-30 of 35 in total

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