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PLM3-1_170_b2_sep16_scaffold_470

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_470_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155..1144
DNA (990bp) protein (330aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_470_2
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1297..2535
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0G181_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL74518.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
PLM3-1_170_b2_sep16_scaffold_470_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2862..4244
DNA (1383bp) protein (461aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034DA2BF
Oxidoreductase {ECO:0000313|EMBL:KIJ76010.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
FAD linked oxidase domain-containing protein
PLM3-1_170_b2_sep16_scaffold_470_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5647..6411
DNA (765bp) protein (255aa)
type 11 methyltransferase bin=RBG_19FT_COMBO_GAL15_69_19 species=Gordonia rhizosphera genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative Methyltransferase type 11
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_470_5
unknown

Not on your lists

comp(6624..6812)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_470_6
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7055..8020
DNA (966bp) protein (322aa)
Extra-cytoplasmic Solute Receptor bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3-1_170_b2_sep16_scaffold_470_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8411..8779
DNA (369bp) protein (123aa)
Extra-cytoplasmic Solute Receptor bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3-1_170_b2_sep16_scaffold_470_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8805..9773
DNA (969bp) protein (323aa)
Extra-cytoplasmic Solute Receptor bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3-1_170_b2_sep16_scaffold_470_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10033..10473
DNA (441bp) protein (147aa)
id=3360388 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_470_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10477..11967
DNA (1491bp) protein (497aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3-1_170_b2_sep16_scaffold_470_11
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12120..12920
DNA (801bp) protein (267aa)
Bll2711 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RQ1_BRADU
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EJZ32578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
oxidoreductase
PLM3-1_170_b2_sep16_scaffold_470_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12980..13972
DNA (993bp) protein (331aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_470_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14583..14789
DNA (207bp) protein (69aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI000381E997
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_470_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15137..16816)
DNA (1680bp) protein (560aa)
Uncharacterized protein Tax=Neptuniibacter caesariensis RepID=Q2BIA6_NEPCE
putative hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b2_sep16_scaffold_470_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16870..17508)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003763F4B
isochorismatase hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_470_16
unknown

Not on your lists

17720..17851
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_470_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18117..18335
DNA (219bp) protein (73aa)
Prevent-host-death family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_470_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18322..18684
DNA (363bp) protein (121aa)
id=2136657 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PilT protein domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_470_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18838..19914
DNA (1077bp) protein (359aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_470_20
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(19938..23117)
DNA (3180bp) protein (1060aa)
Putative peptidase M1, membrane alanine aminopeptidase bin=GWB2_Nitrospirae_rel_47_37 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
peptidase M1, membrane alanine aminopeptidase
Tax=GWB2_Nitrospirae_47_37_curated
PLM3-1_170_b2_sep16_scaffold_470_21
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23564..24637
DNA (1074bp) protein (358aa)
Two-component hybrid sensor and regulator Tax=Arthrospira platensis RepID=D5A329_ARTPN
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAI93146.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
PLM3-1_170_b2_sep16_scaffold_470_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24833..26797
DNA (1965bp) protein (655aa)
PAS domain S-box Tax=Rivularia sp. PCC 7116 RepID=K9RBB7_9CYAN
PAS domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b2_sep16_scaffold_470_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26975..27478
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2IN42_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b2_sep16_scaffold_470_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27927..28514
DNA (588bp) protein (196aa)
Luciferase-like, subgroup bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
F420-dependent methylene-tetrahydromethanopterin reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 24 items

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