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PLM3-1_170_b2_sep16_scaffold_563

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_563_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..566)
DNA (564bp) protein (188aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase associated with various cellular activities AAA_3 bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691..2121)
DNA (1431bp) protein (477aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_563_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2118..2864)
DNA (747bp) protein (249aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_563_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2861..4753)
DNA (1893bp) protein (631aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_563_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5250..5732)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PZ88_9CAUL
greA; transcription elongation factor GreA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_563_6
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(5877..9350)
DNA (3474bp) protein (1158aa)
beta-propeller repeat-containing protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
cell surface glycoprotein (s-layer protein)-like protein
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3-1_170_b2_sep16_scaffold_563_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9808..10785)
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K591_HALHC
oligopeptide/dipeptide ABC transporter, ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10906..11877)
DNA (972bp) protein (324aa)
Oligopeptide ABC transporter ATP-binding protein bin=GWB1_Deltaproteobacteria_rel_55_8 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
oligopeptide/dipeptide ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_9
unknown

Not on your lists

11956..12447
DNA (492bp) protein (164aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_563_10
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

12469..13944
DNA (1476bp) protein (492aa)
Transposase Tax=planctomycete KSU-1 RepID=I3INC9_9PLAN
transposase IS4 family protein
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
PLM3-1_170_b2_sep16_scaffold_563_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..15426
DNA (1095bp) protein (365aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Maritimibacter alkaliphilus genus=Maritimibacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_563_12
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15507..16760
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK15_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ02825.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
PLM3-1_170_b2_sep16_scaffold_563_13
unknown

Not on your lists

comp(17217..17381)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_563_14
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

17681..18514
DNA (834bp) protein (278aa)
hypothetical protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Chloroflexi_56_11_curated
PLM3-1_170_b2_sep16_scaffold_563_15
unknown

Not on your lists

18601..18786
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_563_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19317..20087)
DNA (771bp) protein (257aa)
Putative oxidoreductase yxbG Tax=Marinobacter sp. BSs20148 RepID=M1FBF3_9ALTE
yxbG; oxidoreductase yxbG
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_563_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20201..21499)
DNA (1299bp) protein (433aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CC12_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57763.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_563_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21675..22223)
DNA (549bp) protein (183aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_563_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22237..23364)
DNA (1128bp) protein (376aa)
Yellowish-green 1-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta hydrolase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_563_20
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23786..24766)
DNA (981bp) protein (327aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_563_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(24904..27039)
DNA (2136bp) protein (712aa)
Uncharacterized protein Tax=Massilia timonae CCUG 45783 RepID=K9D6F3_9BURK
peptidase S9A prolyl oligopeptidase domain protein beta-propeller
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_563_22
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27079..28155)
DNA (1077bp) protein (359aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein bin=BACIGN_2 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_23
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28152..29183)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003740DE2
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_24
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29194..30972)
DNA (1779bp) protein (593aa)
extracellular solute-binding protein bin=BACIGN_2 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
family 5 extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30980..31762)
DNA (783bp) protein (261aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_563_26
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31918..33111)
DNA (1194bp) protein (398aa)
Tetratricopeptide repeat family protein bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
TPR repeat-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_563_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33986..36037
DNA (2052bp) protein (684aa)
DNA ligase Tax=uncultured candidate division OP1 bacterium RepID=H5SJT6_9BACT
ligA; NAD-dependent DNA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 27 items

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