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PLM3-1_170_b2_sep16_scaffold_587

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_587_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1..930
DNA (930bp) protein (310aa)
family 3 adenylate cyclase bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
family 3 adenylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_587_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1072..2001
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) (EC:1.1.1.169) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
2-dehydropantoate 2-reductase (Ketopantoate reductase) (KPA reductase) (KPR) (EC:1.1.1.169)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_587_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2005..2907
DNA (903bp) protein (301aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00036F1FDE
cytochrome C
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_587_4
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(2930..4372)
DNA (1443bp) protein (481aa)
N-6 DNA methylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-6 DNA methylase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3-1_170_b2_sep16_scaffold_587_5
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4782..5207)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002EE593C
Uncharacterized protein {ECO:0000313|EMBL:EAW35459.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)).;"
nucleic acid-binding protein, contains PIN domain
PLM3-1_170_b2_sep16_scaffold_587_6

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comp(5204..6127)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Rhodanobacter sp. 115 RepID=I4VJQ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN05544.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_587_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6272..8005)
DNA (1734bp) protein (578aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6F0DE
ATPase AAA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_587_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(8049..9335)
DNA (1287bp) protein (429aa)
Type I restriction modification enzyme protein S Tax=Frankia alni (strain ACN14a) RepID=Q0RKJ6_FRAAA
hsdS; Type I restriction modification enzyme protein S
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b2_sep16_scaffold_587_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9332..11734)
DNA (2403bp) protein (801aa)
Type III restriction protein res subunit bin=GWF2_Planctomycete_41_51 species=Methanolobus psychrophilus genus=Methanolobus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
type III restriction protein res subunit
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_587_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..12785)
DNA (987bp) protein (329aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI0003636478
ATPase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_587_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12803..14206)
DNA (1404bp) protein (468aa)
Ribosome-binding protein 1 Tax=Tupaia chinensis RepID=L9KUP1_TUPCH
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_587_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14252..15307)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDY3_9BACT
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_587_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15346..15912)
DNA (567bp) protein (189aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_587_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16075..16593
DNA (519bp) protein (173aa)
2-isopropylmalate synthase/homocitrate synthase family protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E3D5_GEOLS
alpha-isopropylmalate/homocitrate synthase family transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_587_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16760..17518
DNA (759bp) protein (253aa)
Putative enzyme (3.4.-) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_587_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(17862..18887)
DNA (1026bp) protein (342aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
alpha-glucan phosphorylase
Tax=CSP1_5_NC10
Displaying 16 items

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