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PLM3-1_170_b2_sep16_scaffold_592

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_592_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..348
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..1187)
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1330..2424)
DNA (1095bp) protein (365aa)
Uncharacterized protein Tax=Mycobacterium xenopi RIVM700367 RepID=I0RTA2_MYCXE
putative amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_4
unknown

Not on your lists

comp(2581..3303)
DNA (723bp) protein (241aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_592_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3408..4349)
DNA (942bp) protein (314aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4666..5448
DNA (783bp) protein (261aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI00037FBA5A
3-deoxy-D-manno-octulosonate cytidylyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5429..7075
DNA (1647bp) protein (549aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7104..7928
DNA (825bp) protein (275aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7938..8912
DNA (975bp) protein (325aa)
KpsF/GutQ family protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
kdsD; arabinose-5-phosphate isomerase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8920..9450
DNA (531bp) protein (177aa)
3-deoxy-manno-octulosonate-8-phosphatase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9556..10149
DNA (594bp) protein (198aa)
id=1759803 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10150..10728
DNA (579bp) protein (193aa)
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_592_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10725..11447
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter ATP-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_592_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11450..12925
DNA (1476bp) protein (492aa)
RNA polymerase sigma-54 factor bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpoN; RNA polymerase sigma-54 factor RpoN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_592_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12948..13259
DNA (312bp) protein (104aa)
Ribosomal subunit interface protein bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pseudouridine synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13262..13723
DNA (462bp) protein (154aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PTS system transporter subunit IIa
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_592_17
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13905..14771
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein COCOR_07137 bin=GWD2_Deltaproteobacteria_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glmZ(sRNA)-inactivating NTPase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_592_18
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14776..15051
DNA (276bp) protein (92aa)
Phosphotransferase system, phosphocarrier protein HPr bin=GWD2_Deltaproteobacteria_55_8 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ptsH; phosphocarrier protein HPr
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_592_19
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15372..16550
DNA (1179bp) protein (393aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_592_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16714..17982
DNA (1269bp) protein (423aa)
Adenosylhomocysteinase bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
adenosylhomocysteinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18427..18696
DNA (270bp) protein (90aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AD15
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3-1_170_b2_sep16_scaffold_592_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..19473
DNA (255bp) protein (85aa)
id=14431421 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_23
R_Omnitrophica_50_24, Omnitrophica, Bacteria

Not on your lists

20013..20276
DNA (264bp) protein (88aa)
Conserved domain protein bin=GWC2_Methylomirabilis_70_16 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_50_24_curated
PLM3-1_170_b2_sep16_scaffold_592_24
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20343..20930
DNA (588bp) protein (196aa)
Cysteine dioxygenase type I Tax=uncultured bacterium RepID=C6L1E7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE46816.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
PLM3-1_170_b2_sep16_scaffold_592_25
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20976..22685
DNA (1710bp) protein (570aa)
ansA1; L-asparaginase II (EC:3.5.1.1)
Uncharacterized protein Tax=Hydrocarboniphaga effusa AP103 RepID=I8T3N1_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_592_26
Bacillus sp. RAPc8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22710..23789
DNA (1080bp) protein (360aa)
nthA; nitrile hydratse subunit alpha (EC:4.2.1.84)
Nitrile hydratase alpha subunit Tax=Bacillus sp. RAPc8 RepID=Q84FS5_9BACI
Nitrile hydratase alpha subunit {ECO:0000313|EMBL:AAO23015.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. RAPc8.;"
PLM3-1_170_b2_sep16_scaffold_592_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

23798..24076
DNA (279bp) protein (93aa)
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase bin=GWC2_Methylomirabilis_70_16 species=Pantoea sp. genus=Pantoea taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_592_28
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24087..25271)
DNA (1185bp) protein (395aa)
Methionine synthase vitamin-B12 independent Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T5_SPHTD
methionine synthase vitamin-B12 independent
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3-1_170_b2_sep16_scaffold_592_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25337..26764)
DNA (1428bp) protein (476aa)
Protoporphyrinogen IX and coproporphyrinogen III oxidase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protoporphyrinogen IX and coproporphyrinogen III oxidase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_592_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26842..27786)
DNA (945bp) protein (315aa)
ferrochelatase (EC:4.99.1.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ferrochelatase (EC:4.99.1.1)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying items 1-30 of 31 in total

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