ggKbase home page

PLM3-1_170_b2_sep16_scaffold_599

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_599_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

267..686
DNA (420bp) protein (140aa)
Two-component hybrid sensor and regulator Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
two-component hybrid sensor and regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b2_sep16_scaffold_599_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(776..1666)
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family Tax=Cystobacter fuscus DSM 2262 RepID=S9PLX7_9DELT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EPX64011.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
LysR family transcriptional regulator
PLM3-1_170_b2_sep16_scaffold_599_3
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1827..2933
DNA (1107bp) protein (369aa)
putative nitronate monooxygenase (EC:1.13.12.16)
Putative nitronate monooxygenase {ECO:0000313|EMBL:CEG56109.1}; EC=1.13.12.16 {ECO:0000313|EMBL:CEG56109.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
Nitropropane dioxygenase Tax=Brevibacillus borstelensis AK1 RepID=M8DY27_9BACL
PLM3-1_170_b2_sep16_scaffold_599_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..4163)
DNA (1032bp) protein (344aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_599_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4400..5551)
DNA (1152bp) protein (384aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_599_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6223..7086
DNA (864bp) protein (288aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI00035D81F4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3-1_170_b2_sep16_scaffold_599_7
unknown

Not on your lists

7232..7504
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_599_8
unknown

Not on your lists

comp(7623..8399)
DNA (777bp) protein (259aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_599_9
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8507..9013)
DNA (507bp) protein (169aa)
Excinuclease ABC C subunit domain protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQU0_SIDLE
excinuclease ABC subunit C
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3-1_170_b2_sep16_scaffold_599_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9245..10612)
DNA (1368bp) protein (456aa)
MmgE/PrpD family protein Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YIK9_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b2_sep16_scaffold_599_11
unknown

Not on your lists

comp(10817..11362)
DNA (546bp) protein (182aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_599_12
unknown

Not on your lists

comp(11405..11938)
DNA (534bp) protein (178aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_599_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12423..12638)
DNA (216bp) protein (72aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JC34_NITOC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_599_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12771..13700)
DNA (930bp) protein (310aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002E13CE8
NMT1/THI5 like family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3-1_170_b2_sep16_scaffold_599_15
unknown

Not on your lists

comp(13774..14061)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_599_16
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(14078..14866)
DNA (789bp) protein (263aa)
Methyltransferase type 11 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UP92_METVS
type 11 methyltransferase
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3-1_170_b2_sep16_scaffold_599_17
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14905..15993)
DNA (1089bp) protein (363aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_599_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16144..17799)
DNA (1656bp) protein (552aa)
Acetolactate synthase isozyme II large subunit Tax=Oceanibaculum indicum P24 RepID=K2JS04_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ45726.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
PLM3-1_170_b2_sep16_scaffold_599_19
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(17762..18547)
DNA (786bp) protein (262aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SSG6_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL59102.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
Displaying 19 items

View Taxonomy