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PLM3-1_170_b2_sep16_scaffold_647

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_647_1
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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comp(3..1097)
DNA (1095bp) protein (365aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV Tax=Nitrospina gracilis 3/211 RepID=M1Z9H3_9BACT
PLM3-1_170_b2_sep16_scaffold_647_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1470..4097)
DNA (2628bp) protein (876aa)
clpB; chaperone bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
clpB; chaperone
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_647_3
unknown

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comp(4286..4456)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_647_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4483..5205)
DNA (723bp) protein (241aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative circadian clock protein, KaiC
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_647_5
Pongo abelii, Pongo, Primates, Mammalia, Chordata, Metazoa

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comp(5545..8703)
DNA (3159bp) protein (1053aa)
PREDICTED: rootletin isoform X3 Tax=Macaca fascicularis RepID=UPI0003AB624D
Uncharacterized protein {ECO:0000313|Ensembl:ENSPPYP00000002108}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo.;" source="Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_647_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9040..10062
DNA (1023bp) protein (341aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_647_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10709..11140
DNA (432bp) protein (144aa)
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWD2_Deltaproteobacteria_55_8 species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Glyoxalase family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_647_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11210..12523)
DNA (1314bp) protein (438aa)
CBS domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_647_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12744..14990
DNA (2247bp) protein (749aa)
Helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_647_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14981..15688)
DNA (708bp) protein (236aa)
Arylmalonate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Pyrococcus sp. genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
arylmalonate decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_647_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15685..16779)
DNA (1095bp) protein (365aa)
Amidohydrolase 2 Tax=Frankia sp. (strain EuI1c) RepID=E3J7T4_FRASU
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_647_12
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(16933..18006)
DNA (1074bp) protein (358aa)
Amino acid ABC transporter substrate-binding protein, PAAT family Tax=Calothrix sp. PCC 7507 RepID=K9PC48_9CYAN
amino acid ABC transporter substrate-binding protein
Amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:AFY30960.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
Displaying 12 items

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