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PLM3-1_170_b2_sep16_scaffold_924

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_924_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(92..1111)
DNA (1020bp) protein (340aa)
Integron integrase bin=GWA2_Elusimicrobia_69_24 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
integron integrase
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3-1_170_b2_sep16_scaffold_924_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1374..2381
DNA (1008bp) protein (336aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter, periplasmic substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_924_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2416..2931
DNA (516bp) protein (172aa)
hypothetical protein Tax=Pandoraea sp. B-6 RepID=UPI000346F067
glyoxalase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_924_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3110..3742
DNA (633bp) protein (211aa)
id=2112244 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_924_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3753..5450
DNA (1698bp) protein (566aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_924_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..6706
DNA (1257bp) protein (419aa)
RND family efflux transporter bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Macrolide-specific efflux protein macA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_924_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6693..9878
DNA (3186bp) protein (1062aa)
Acriflavin resistance protein bin=GWD2_Deltaproteobacteria_55_8 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acriflavin resistance protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_924_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10071..10760)
DNA (690bp) protein (230aa)
ABC-type molybdate transport system, periplasmic component Tax=Polaromonas sp. CF318 RepID=J2U1D2_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_924_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10765..11406)
DNA (642bp) protein (214aa)
Methyltransferase type 12 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5B0_METSW
methylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_924_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11646..12014
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_924_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

11998..12618
DNA (621bp) protein (207aa)
Uncharacterized conserved protein bin=GWC2_Deltaproteobacteria_55_46 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM3-1_170_b2_sep16_scaffold_924_12
unknown

Not on your lists

12988..13641
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_924_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13883..14452)
DNA (570bp) protein (190aa)
Phosphorylase bin=GWD2_Deltaproteobacteria_55_8 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_924_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14704..15786
DNA (1083bp) protein (361aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQE2_9CYAN
phosphonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_924_15
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

16034..16627
DNA (594bp) protein (198aa)
hypothetical protein
Uncharacterized protein bin=GWA2_Bacteroidetes_A19_40_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
PLM3-1_170_b2_sep16_scaffold_924_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16661..17842)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037C4CEE
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_924_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18091..19254)
DNA (1164bp) protein (388aa)
Putative CoA-transferase family III protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HD83_ACTM4
putative CoA-transferase family III protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_924_18
unknown

Not on your lists

comp(19626..20033)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_924_19
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20439..20765)
DNA (327bp) protein (109aa)
4-oxalomesaconate hydratase (EC:4.2.1.83)
4-oxalomesaconate hydratase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_924_20

Not on your lists

20822..21826
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2A752_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD52078.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
esterase/lipase
PLM3-1_170_b2_sep16_scaffold_924_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22013..22507)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW98498.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
filamentous hemagglutinin family domain-containing protein
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
PLM3-1_170_b2_sep16_scaffold_924_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22822..23826)
DNA (1005bp) protein (335aa)
4-oxalomesaconate hydratase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase 2
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 22 items

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