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PLM3-1_170_b2_sep16_scaffold_1043

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1043_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1213)
DNA (1212bp) protein (404aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1646..2572
DNA (927bp) protein (309aa)
Amidohydrolase family bin=GWA2_Ignavibacteriae_54_16_partial species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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2672..3931
DNA (1260bp) protein (420aa)
L-sorbosone dehydrogenase Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHD4_GLOVI
L-sorbosone dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b2_sep16_scaffold_1043_4
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4135..4794)
DNA (660bp) protein (220aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutaredoxin family protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_1043_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5248..6651
DNA (1404bp) protein (468aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00031C349C
D-alanine export protein
Putative membrane protein involved in D-alanine export {ECO:0000313|EMBL:AGA29945.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3-1_170_b2_sep16_scaffold_1043_6
unknown

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6658..7779
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002E6E980
PLM3-1_170_b2_sep16_scaffold_1043_7
unknown

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comp(7797..8120)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1043_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8350..10038)
DNA (1689bp) protein (563aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit Tax=Rhizobium sp. CF080 RepID=J3BLB5_9RHIZ
N-methylhydantoinase B
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1043_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10044..10379)
DNA (336bp) protein (112aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11369..12454)
DNA (1086bp) protein (362aa)
Cupin domain protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM3-1_170_b2_sep16_scaffold_1043_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12501..13559)
DNA (1059bp) protein (353aa)
UPI0002776938 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cupin domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14376..14618)
DNA (243bp) protein (81aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14720..15226)
DNA (507bp) protein (169aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1043_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15278..15547)
DNA (270bp) protein (90aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 14 items

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