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PLM3-1_170_b2_sep16_scaffold_1047

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1047_1
unknown

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1047_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

361..678
DNA (318bp) protein (106aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SQH0_9BACT
DNA polymerase subunit beta
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b2_sep16_scaffold_1047_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

752..1006
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML86_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b2_sep16_scaffold_1047_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1296..1589
DNA (294bp) protein (98aa)
Plasmid maintenance system antidote protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Plasmid maintenance system antidote protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1644..4607
DNA (2964bp) protein (988aa)
SIR2-like domain protein Tax=Pseudomonas putida S610 RepID=V6JC53_PSEPU
SIR2-like domain protein
SIR2-like domain protein {ECO:0000313|EMBL:EST17390.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
PLM3-1_170_b2_sep16_scaffold_1047_6
unknown

Not on your lists

comp(4589..5272)
DNA (684bp) protein (228aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1047_7
unknown

Not on your lists

comp(6192..6968)
DNA (777bp) protein (259aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1047_8
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(7642..7935)
DNA (294bp) protein (98aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM3-1_170_b2_sep16_scaffold_1047_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7954..8280)
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Thermus aquaticus Y51MC23 RepID=B7A5D0_THEAQ
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b2_sep16_scaffold_1047_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8316..8639)
DNA (324bp) protein (108aa)
Nucleotidyltransferase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUG7_METAC
nucleotidyltransferase
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b2_sep16_scaffold_1047_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8879..9193
DNA (315bp) protein (105aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein Tax=delta proteobacterium NaphS2 RepID=D8F2I0_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9232..10215)
DNA (984bp) protein (328aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E82_MESSB
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:ABG64293.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
PLM3-1_170_b2_sep16_scaffold_1047_13
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(10276..10848)
DNA (573bp) protein (191aa)
Tax=RBG_16_Chloroflexi_51_9_curated
PLM3-1_170_b2_sep16_scaffold_1047_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10970..11989)
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B3E982
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_15
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12002..13066)
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase superfamily, zinc-containing Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG84_MOOTA
alcohol dehydrogenase
Alcohol dehydrogenase superfamily, zinc-containing {ECO:0000313|EMBL:ABC20555.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
PLM3-1_170_b2_sep16_scaffold_1047_16
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13288..14310)
DNA (1023bp) protein (341aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family Tax=Synechocystis sp. PCC 7509 RepID=L8KQB2_9SYNC
TRAP dicarboxylate transporter subunit DctP
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3-1_170_b2_sep16_scaffold_1047_17

Not on your lists

comp(14856..15101)
DNA (246bp) protein (82aa)
Putative uncharacterized protein Tax=uncultured bacterium RepID=Q565X9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAI78852.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1047_18
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15104..15385)
DNA (282bp) protein (94aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YB36_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27877.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1047_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15624..16658)
DNA (1035bp) protein (345aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16610..16987)
DNA (378bp) protein (126aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b2_sep16_scaffold_1047_21
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17024..18172)
DNA (1149bp) protein (383aa)
Spermidine/putrescine ABC transporter ATPase subunit bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter ATP-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1047_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18242..19894)
DNA (1653bp) protein (551aa)
hypothetical protein Tax=Pseudomonas agarici RepID=UPI00037029A0
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20000..20815)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Bacillus fordii RepID=UPI00037AA3E7
nitrate transporter protein CmpC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1047_24
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21014..21733
DNA (720bp) protein (240aa)
Transcriptional regulator, GntR family bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1047_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21764..23134
DNA (1371bp) protein (457aa)
allB; allantoinase (EC:3.5.2.5)
Allantoinase Tax=Halomonas sp. HAL1 RepID=G4F3F5_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1047_26
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23206..24117
DNA (912bp) protein (304aa)
Carbon monoxide dehydrogenase medium chain bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD-binding molybdopterin dehydrogenase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1047_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24257..24730
DNA (474bp) protein (158aa)
carbon-monoxide dehydrogenase (acceptor) bin=GWD2_Deltaproteobacteria_55_8 species=Paracoccus sp. TRP genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1047_28
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24966..27278
DNA (2313bp) protein (771aa)
Oxidoreductase molybdopterin binding subunit bin=GWD2_Deltaproteobacteria_55_8 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
oxidoreductase molybdopterin binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1047_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27495..28550
DNA (1056bp) protein (352aa)
YVTN beta-propeller repeat-containing protein bin=bin3_NC10 species=Burkholderia vietnamiensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
surface antigen protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 29 items

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