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PLM3-1_170_b2_sep16_scaffold_1154

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1154_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..598)
DNA (597bp) protein (199aa)
Fumarylacetoacetate (FAA) hydrolase family protein Tax=Oceanibaculum indicum P24 RepID=K2J5D5_9PROT
5-carboxymethyl-2-hydroxymuconate delta-isomerase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1154_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

979..1374
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B6M3_TURPD
hypothetical protein
Tax=CG_Arma_01
PLM3-1_170_b2_sep16_scaffold_1154_3
unknown

Not on your lists

comp(1680..2174)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1154_4

Not on your lists

comp(2178..3449)
DNA (1272bp) protein (424aa)
Uncharacterized protein Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XA59_METSD
Uncharacterized protein {ECO:0000313|EMBL:KKM00017.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1154_5
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

3893..4768
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Arthrospira RepID=K1WZL2_ARTPT
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
PLM3-1_170_b2_sep16_scaffold_1154_6
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

4784..6751
DNA (1968bp) protein (656aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344E505
DNA methylase N-4/N-6 domain-containing protein
Tax=CG_Arma_02
PLM3-1_170_b2_sep16_scaffold_1154_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6838..10386)
DNA (3549bp) protein (1183aa)
Transcription-repair coupling factor bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transcription-repair coupling factor
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10383..10745)
DNA (363bp) protein (121aa)
hypothetical protein SCB01_06536 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1154_9
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11009..11278
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9443 RepID=I4G3U1_MICAE
hypothetical protein
Tax=CG_Anaero_02
PLM3-1_170_b2_sep16_scaffold_1154_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11257..11652
DNA (396bp) protein (132aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI000369BDBB
Uncharacterized protein {ECO:0000313|EMBL:ETW97075.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1154_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11844..12050
DNA (207bp) protein (69aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tctC; Tripartite tricarboxylate transporter family receptor
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1154_12
Pseudomonas sp. CFII64, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12070..12996)
DNA (927bp) protein (309aa)
Lipoprotein Tax=Pseudomonas sp. CFII64 RepID=S6GWZ5_9PSED
Lipoprotein {ECO:0000313|EMBL:EPJ76760.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1154_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13228..14013
DNA (786bp) protein (262aa)
Binding-protein-dependent transporters inner membrane component Tax=Bacillus alcalophilus ATCC 27647 RepID=J8Q770_BACAO
binding-protein-dependent transporters inner membrane component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15181
DNA (1014bp) protein (338aa)
ABC transporter substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15191..15811
DNA (621bp) protein (207aa)
ABC transporter ATP-binding protein Tax=Variovorax paradoxus RepID=UPI0003671FB5
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16144..18597)
DNA (2454bp) protein (818aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035ED86E
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18598..19080)
DNA (483bp) protein (161aa)
carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) (EC:1.2.99.2)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003791F62
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ETW96851.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3-1_170_b2_sep16_scaffold_1154_18
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19092..19976)
DNA (885bp) protein (295aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037CA0B3
molybdopterin dehydrogenase FAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_19
unknown

Not on your lists

20442..20732
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1154_20
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

20769..21074
DNA (306bp) protein (102aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4005F
Tax=GWF2_Planctomycetes_40_8_curated
PLM3-1_170_b2_sep16_scaffold_1154_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21081..21428
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW95119.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM3-1_170_b2_sep16_scaffold_1154_22
unknown

Not on your lists

comp(21459..21635)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1154_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21767..23239
DNA (1473bp) protein (491aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1154_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23339..23560)
DNA (222bp) protein (74aa)
Adenylate/guanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1154_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23573..24898)
DNA (1326bp) protein (442aa)
adenylate/guanylate cyclase (EC:4.6.1.1)
adenylate/guanylate cyclase bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1154_26
unknown

Not on your lists

comp(24912..25649)
DNA (738bp) protein (246aa)
PLM3-1_170_b2_sep16_scaffold_1154_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25911..28307
DNA (2397bp) protein (799aa)
Molybdopterin oxidoreductase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1154_28
unknown

Not on your lists

comp(28252..28515)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1154_29
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28521..29141)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KHE90461.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
conserved exported protein of unknown function bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1154_30
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29138..30196)
DNA (1059bp) protein (353aa)
ABC transporter, periplasmic substrate-binding protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0X1_PELCD
ABC transporter substrate-binding protein
ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:ABA89986.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
Displaying items 1-30 of 35 in total

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