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PLM3-1_170_b2_sep16_scaffold_1155

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1155_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1120
DNA (1119bp) protein (373aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1155_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1100..2086)
DNA (987bp) protein (329aa)
galactose-1-phosphate uridyl transferase (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1155_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2098..2724)
DNA (627bp) protein (209aa)
Ribosomal RNA large subunit methyltransferase E Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5C9_METSW
ribosomal RNA large subunit methyltransferase E
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1155_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2854..3627)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3HBD6_PSEAC
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1155_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3851..4576
DNA (726bp) protein (242aa)
Enoyl-CoA hydratase bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dch; dienoyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1155_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..5550
DNA (768bp) protein (256aa)
Acetyltransferase (GNAT) domain protein Tax=Leptospira interrogans str. L1207 RepID=M6M1A6_LEPIR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5537..6382
DNA (846bp) protein (282aa)
1-Acyl-sn-glycerol-3-phosphate acyltransferase Tax=Gluconobacter morbifer G707 RepID=G6XGV3_9PROT
phospholipid/glycerol acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6368..6820)
DNA (453bp) protein (151aa)
Carbon monoxide dehydrogenase subunit G bin=GWD2_Deltaproteobacteria_55_8 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carbon monoxide dehydrogenase subunit G
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1155_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6817..7749)
DNA (933bp) protein (311aa)
Nicotine dehydrogenase chain A bin=GWD2_Deltaproteobacteria_55_8 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nicotine dehydrogenase chain A
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1155_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7760..8227)
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
(2Fe-2S)-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1155_11
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8452..9561)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase Tax=Dyella ginsengisoli RepID=UPI000349A5A4
adhC; Zn-dependent alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM3-1_170_b2_sep16_scaffold_1155_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9948..10565
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J8_9ZZZZ
NIPSNAP family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10604..11581
DNA (978bp) protein (326aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1155_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11996..13129
DNA (1134bp) protein (378aa)
Dihydroorotate dehydrogenase (quinone) Tax=Pedosphaera parvula Ellin514 RepID=B9XSG1_9BACT
dihydroorotate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13102..13698)
DNA (597bp) protein (199aa)
Molybdenum hydroxylase accessory protein, YgfJ family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8E1_GEODF
molybdenum hydroxylase accessory protein, YgfJ family
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1155_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14040..14405
DNA (366bp) protein (122aa)
pts; 6-pyruvoyl tetrahydropterin synthase
pts; 6-pyruvoyl tetrahydropterin synthase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1155_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14534..15478)
DNA (945bp) protein (315aa)
aldo/keto reductase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B37B34
aldo/keto reductase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1155_trna_1
unknown

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15641..15712
DNA (72bp)
transferRNA Gly
PLM3-1_170_b2_sep16_scaffold_1155_18
unknown

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comp(15652..15804)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1155_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15835..16101
DNA (267bp) protein (89aa)
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
8-amino-7-oxononanoate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16367..17551
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI00036FDDDE
Uncharacterized protein {ECO:0000313|EMBL:ETX04609.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative oxidoreductase
PLM3-1_170_b2_sep16_scaffold_1155_21
unknown

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17715..17846
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1155_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17921..19624
DNA (1704bp) protein (568aa)
ABC-type Fe3+ transport system permease component bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system permease component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19758..20873
DNA (1116bp) protein (372aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Putrescine transport ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21648..22295
DNA (648bp) protein (216aa)
id=2090298 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1155_25

Not on your lists

22560..22865
DNA (306bp) protein (102aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI000361C520
Uncharacterized protein {ECO:0000313|EMBL:KKM68874.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
extracellular solute-binding protein
PLM3-1_170_b2_sep16_scaffold_1155_26
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23045..23455)
DNA (411bp) protein (137aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1155_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

24033..25220
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B68BA6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b2_sep16_scaffold_1155_28
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25759..26337
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Crocosphaera watsonii WH 0401 RepID=T2J775_CROWT
Uncharacterized protein {ECO:0000313|EMBL:ETX07562.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
sodium/dicarboxylate symporter family protein
PLM3-1_170_b2_sep16_scaffold_1155_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26615..27544
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Thauera sp. (strain MZ1T) RepID=C4ZNR8_THASP
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 30 items

View Taxonomy