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PLM3-1_170_b2_sep16_scaffold_1169

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1169_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1169_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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100..741
DNA (642bp) protein (214aa)
Glycerol-3-phosphate acyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XGN5_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1169_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

942..1922
DNA (981bp) protein (327aa)
bioB; biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
bioB; biotin synthase (EC:2.8.1.6)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2484..3464
DNA (981bp) protein (327aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1169_5
unknown

Not on your lists

4069..4632
DNA (564bp) protein (188aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1169_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4848..5096)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X4N6_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5157..5717)
DNA (561bp) protein (187aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Haloferax elongans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protein of unknown function DUF6 transmembrane
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6427..7791)
DNA (1365bp) protein (455aa)
Peptidase U62 Tax=Candidatus Nitrospira defluvii RepID=B3U4U4_9BACT
pmbA; protease pmbA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(7964..9508)
DNA (1545bp) protein (515aa)
Putative peptidase TldD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLM5_9BACT
tldD; peptidase TldD
Putative peptidase TldD {ECO:0000313|EMBL:CBE69932.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b2_sep16_scaffold_1169_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9682..10749
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C731_DESTA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1169_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10808..11266)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TKN6_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11268..13091)
DNA (1824bp) protein (608aa)
Uncharacterized protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNY5_MARHT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13426..14205)
DNA (780bp) protein (260aa)
IclR family transcriptional regulator bin=bin5_DeltaP species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
IclR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1169_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14725..16212
DNA (1488bp) protein (496aa)
anthranilate synthase component I (EC:4.1.3.27)
Fragment of Anthranilate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1169_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16209..16775
DNA (567bp) protein (189aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1169_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16783..17202
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Threonyl-tRNA synthetase editing domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17329..17883
DNA (555bp) protein (185aa)
SpoIID/LytB domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1169_18
unknown

Not on your lists

18230..18769
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1169_19
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18834..19847)
DNA (1014bp) protein (338aa)
Aminocarboxymuconate-semialdehyde decarboxylase (Fragment) bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. TJI49 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20193..20657
DNA (465bp) protein (155aa)
hypothetical protein Tax=Paenibacillus daejeonensis RepID=UPI00037C5872
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_21
Micromonas pusilla, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

21005..22255
DNA (1251bp) protein (417aa)
Predicted protein Tax=Micromonas pusilla (strain CCMP1545) RepID=C1N0U0_MICPC
Predicted protein {ECO:0000313|EMBL:EEH54081.1}; species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga).;"
PLM3-1_170_b2_sep16_scaffold_1169_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

22438..23958
DNA (1521bp) protein (507aa)
putative RecB family nuclease; K06860 uncharacterized protein bin=bin3_NC10 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=bin3_NC10 organism_group=NC10
putative RecB family nuclease
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_1169_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24001..24381
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BFZ5_9BACL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_24
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24448..26013
DNA (1566bp) protein (522aa)
TPR repeat Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFX5_9BRAD
TPR repeat {ECO:0000313|EMBL:CCE05363.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
conserved protein of unknown function, TPR repeat domain
PLM3-1_170_b2_sep16_scaffold_1169_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26010..26546
DNA (537bp) protein (179aa)
TPR repeat Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BT9_POLSJ
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABE44003.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3-1_170_b2_sep16_scaffold_1169_26
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26515..27699)
DNA (1185bp) protein (395aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1169_27
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27852..28607)
DNA (756bp) protein (252aa)
Transcriptional regulator, Sir2 family Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC12_PHEZH
Sir2 family transcriptional regulator
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1169_28
unknown

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comp(28636..28791)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1169_29
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29067..30773
DNA (1707bp) protein (569aa)
Amidohydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1169_30
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30801..31793
DNA (993bp) protein (331aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying items 1-30 of 33 in total

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