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PLM3-1_170_b2_sep16_scaffold_1607

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1607_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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61..840
DNA (780bp) protein (260aa)
cytochrome C peroxidase (EC:1.11.1.5)
Putative cytochrome c peroxidase Tax=Bradyrhizobium sp. ORS 285 RepID=H0S544_9BRAD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3-1_170_b2_sep16_scaffold_1607_2
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1378..1782
DNA (405bp) protein (135aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
ATP/cobalamin adenosyltransferase Tax=Pelosinus RepID=I8RH23_9FIRM
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EIW18983.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
PLM3-1_170_b2_sep16_scaffold_1607_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1976..3307
DNA (1332bp) protein (444aa)
Reductive dehalogenase bin=GWD2_Deltaproteobacteria_55_8 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rdhA; putative reductive dehalogenase subunit A
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1607_4
unknown

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3307..3936
DNA (630bp) protein (210aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1607_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4063..4722
DNA (660bp) protein (220aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U1M9_SULAD
4Fe-4S ferredoxin
Uncharacterized protein {ECO:0000313|EMBL:AEW06634.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
PLM3-1_170_b2_sep16_scaffold_1607_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4822..5217
DNA (396bp) protein (132aa)
DoxX family protein Tax=Pontibacter sp. BAB1700 RepID=J1FDF7_9BACT
DoxX family protein {ECO:0000313|EMBL:EJF08249.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
DoxX family protein
PLM3-1_170_b2_sep16_scaffold_1607_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5393..5722
DNA (330bp) protein (110aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000368FA5E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b2_sep16_scaffold_1607_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5719..5964
DNA (246bp) protein (82aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b2_sep16_scaffold_1607_9
unknown

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comp(5938..6279)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1607_10
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6697..6852
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYK8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU39987.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
DoxX family protein
PLM3-1_170_b2_sep16_scaffold_1607_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6954..7535)
DNA (582bp) protein (194aa)
hypothetical protein Tax=Pseudomonas stutzeri RepID=UPI0002D290E3
transposase IS4 family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3-1_170_b2_sep16_scaffold_1607_12
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7632..7787
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYK8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EAU39987.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
DoxX family protein
PLM3-1_170_b2_sep16_scaffold_1607_13
unknown

Not on your lists

comp(7857..8240)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Glaciecola chathamensis S18K6 RepID=K6WT98_9ALTE
PLM3-1_170_b2_sep16_scaffold_1607_14
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8769..9899)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZV37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ19776.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
PLM3-1_170_b2_sep16_scaffold_1607_15
unknown

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comp(10022..10165)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1607_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10437..10922)
DNA (486bp) protein (162aa)
Putative dioxygenase Tax=Gordonia malaquae NBRC 108250 RepID=M3VAY0_9ACTO
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1607_17
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(11425..11916)
DNA (492bp) protein (164aa)
BsuBI/PstI restriction endonuclease, C-terminal Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y582_NITMU
BsuBI/PstI restriction endonuclease, C-terminal
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3-1_170_b2_sep16_scaffold_1607_18
unknown

Not on your lists

comp(12192..12389)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1607_19
unknown

Not on your lists

12511..12801
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1607_20
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12848..13378
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VL81_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIZ16616.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;"
PLM3-1_170_b2_sep16_scaffold_1607_21
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13756..14520
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1607_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14609..16183
DNA (1575bp) protein (525aa)
AMP-dependent synthetase and ligase Tax=Burkholderia cenocepacia (strain HI2424) RepID=A0K352_BURCH
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 22 items

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