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PLM3-1_170_b2_sep16_scaffold_1623

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1623_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1025)
DNA (1023bp) protein (341aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1623_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(995..1510)
DNA (516bp) protein (172aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1623_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1522..2775)
DNA (1254bp) protein (418aa)
ATP-dependent Clp protease ATP-binding subunit ClpX bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATP-dependent protease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1623_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2796..3398)
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1623_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3432..4757)
DNA (1326bp) protein (442aa)
Trigger factor bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tig; ribosome-associated peptidylprolyl cis-trans isomerase, FKBP-type (trigger factor)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1623_trna_6
unknown

Not on your lists

comp(4983..5062)
DNA (80bp)
transferRNA Leu
PLM3-1_170_b2_sep16_scaffold_1623_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5367..5690)
DNA (324bp) protein (108aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1623_7
unknown

Not on your lists

comp(5777..6271)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1623_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6659..6889)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHY3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1623_trna_5
unknown

Not on your lists

comp(7265..7335)
DNA (71bp)
transferRNA Lys
PLM3-1_170_b2_sep16_scaffold_1623_9
unknown

Not on your lists

7486..7980
DNA (495bp) protein (165aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1623_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

7977..8348
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b2_sep16_scaffold_1623_trna_4
unknown

Not on your lists

comp(8396..8468)
DNA (73bp)
transferRNA Lys
PLM3-1_170_b2_sep16_scaffold_1623_trna_3
unknown

Not on your lists

comp(8569..8641)
DNA (73bp)
transferRNA His
PLM3-1_170_b2_sep16_scaffold_1623_trna_2
unknown

Not on your lists

comp(8766..8839)
DNA (74bp)
transferRNA Arg
PLM3-1_170_b2_sep16_scaffold_1623_trna_1
unknown

Not on your lists

comp(8941..9014)
DNA (74bp)
transferRNA Pro
PLM3-1_170_b2_sep16_scaffold_1623_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9055..9675)
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CA24_DESTA
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1623_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9688..10410)
DNA (723bp) protein (241aa)
ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH Tax=Syntrophus aciditrophicus (strain SB) RepID=RNPH_SYNAS
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_1623_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10591..12009)
DNA (1419bp) protein (473aa)
aldehyde-dehydrogenase-like protein y4uC (EC:1.2.1.-)
Putative aldehyde-dehydrogenase-like protein y4uC Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIR4_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1623_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12122..12634)
DNA (513bp) protein (171aa)
HD-superfamily hydrolase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
metal dependent phosphohydrolase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 20 items

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