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PLM3-1_170_b2_sep16_scaffold_1728

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1728_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..511)
DNA (510bp) protein (170aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1728_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(740..916)
DNA (177bp) protein (59aa)
Methylmalonyl-CoA epimerase Tax=Burkholderia xenovorans (strain LB400) RepID=Q13YB9_BURXL
glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b2_sep16_scaffold_1728_3
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(935..2104)
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI00037EE8DD
Uncharacterized protein {ECO:0000313|EMBL:KIJ85291.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1728_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2224..2820)
DNA (597bp) protein (199aa)
Citrate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
citrate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1728_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3022..3759)
DNA (738bp) protein (246aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1728_6
unknown

Not on your lists

comp(3756..3971)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1728_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4134..5381
DNA (1248bp) protein (416aa)
Metallopeptidase family M24 protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium CSL12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M24
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1728_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5560..6153)
DNA (594bp) protein (198aa)
Putative uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM3-1_170_b2_sep16_scaffold_1728_9
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

6889..7266
DNA (378bp) protein (126aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI00036121FB
hypothetical protein
Tax=RBG_16_Planctomycetes_41_13_curated
PLM3-1_170_b2_sep16_scaffold_1728_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7456..8652
DNA (1197bp) protein (399aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1728_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8912..9913
DNA (1002bp) protein (334aa)
N5N10-methylenetetrahydromethanopterin reductase bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
N5N10-methylenetetrahydromethanopterin reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1728_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10027..11100
DNA (1074bp) protein (358aa)
Putative uncharacterized protein Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EDL4_AMICL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1728_13
unknown

Not on your lists

comp(11513..12079)
DNA (567bp) protein (189aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1728_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12448..13578)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DE296
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b2_sep16_scaffold_1728_15
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13729..13854)
DNA (126bp) protein (42aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM3-1_170_b2_sep16_scaffold_1728_16
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14034..14366)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZJJ1_ANACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ58687.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
PLM3-1_170_b2_sep16_scaffold_1728_17
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14363..14590)
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CTJ0_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI13847.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
PLM3-1_170_b2_sep16_scaffold_1728_18
unknown

Not on your lists

14646..14987
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1728_19
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14847..15347)
DNA (501bp) protein (167aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
putative conserved protein
Tax=GWC2_Deltaproteobacteria_65_14_curated
Displaying 19 items

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