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PLM3-1_170_b2_sep16_scaffold_1940

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1940_1
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)
X-Pro dipeptidyl-peptidase Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYZ1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3-1_170_b2_sep16_scaffold_1940_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..1527)
DNA (1224bp) protein (408aa)
hypothetical protein Tax=Rhodococcus RepID=UPI00037A80D3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_3
unknown

Not on your lists

comp(1527..1703)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1940_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1741..1992)
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1940_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2296..2919)
DNA (624bp) protein (208aa)
Urea carboxylase-associated protein 1 bin=GWD2_Deltaproteobacteria_55_8 species=Pantoea sp. Sc1 genus=Pantoea taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
urea carboxylase-associated protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3178..3663)
DNA (486bp) protein (162aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_7
unknown

Not on your lists

3696..3842
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1940_8
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3882..4238
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3-1_170_b2_sep16_scaffold_1940_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4529..4990)
DNA (462bp) protein (154aa)
hypothetical protein bin=bin7_NC10_sister species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4997..5992)
DNA (996bp) protein (332aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6309..7322)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1940_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7410..8552)
DNA (1143bp) protein (381aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1940_13

Not on your lists

comp(9212..10297)
DNA (1086bp) protein (362aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:EQD51756.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PLM3-1_170_b2_sep16_scaffold_1940_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10435..11523
DNA (1089bp) protein (363aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_1940_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11713..12453
DNA (741bp) protein (247aa)
transcriptional regulator bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_16
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12450..13649
DNA (1200bp) protein (400aa)
Orf c01004 protein bin=GWC2_Chloroflexi_73_18 species=Metallosphaera sedula genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b2_sep16_scaffold_1940_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..14887
DNA (1242bp) protein (414aa)
pyruvate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, alpha subunit bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14905..15900
DNA (996bp) protein (332aa)
Pyruvate-ferredoxin oxidoreductase beta-2 bin=GWC2_Chloroflexi_73_18 species=Metallosphaera sedula genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
thiamine pyrophosphate binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b2_sep16_scaffold_1940_19
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16174..16416
DNA (243bp) protein (81aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM3-1_170_b2_sep16_scaffold_1940_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16413..16640
DNA (228bp) protein (76aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Methanosaeta harundinacea genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_1940_21
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

17280..17900
DNA (621bp) protein (207aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5X0_GEOUR
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3-1_170_b2_sep16_scaffold_1940_22
unknown

Not on your lists

comp(17942..18124)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 22 items

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