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PLM3-1_170_b2_sep16_scaffold_5628

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_5628_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..811)
DNA (810bp) protein (270aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
beta-propeller domain-containing protein, methanol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3-1_170_b2_sep16_scaffold_5628_2
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(858..1586)
DNA (729bp) protein (243aa)
Cytoplasmic protein Tax=uncultured candidate division OP1 bacterium RepID=H5SRD6_9BACT
Cytoplasmic protein {ECO:0000313|EMBL:BAL58653.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
cytoplasmic protein
PLM3-1_170_b2_sep16_scaffold_5628_3
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1626..2576)
DNA (951bp) protein (317aa)
beta-propeller domains of methanol dehydrogenase type
Putative uncharacterized protein bin=GWF2_Geobacter_54_21 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:AJE03419.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM3-1_170_b2_sep16_scaffold_5628_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2584..3183)
DNA (600bp) protein (200aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_5628_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3363..4214)
DNA (852bp) protein (284aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=Synechococcus sp. PCC 7502 RepID=K9SXN0_9SYNE
nitrate/sulfonate/bicarbonate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_5628_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(4207..4707)
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB34_THET1
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ41999.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_170_b2_sep16_scaffold_5628_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5097..5411
DNA (315bp) protein (105aa)
50S ribosomal protein L21 bin=GWD2_Deltaproteobacteria_55_8 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rplU; 50S ribosomal protein L21
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_5628_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5426..5683
DNA (258bp) protein (86aa)
50S ribosomal protein L27 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpmA; 50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_5628_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6193..6963
DNA (771bp) protein (257aa)
GTPase obg bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
obgE; GTPase ObgE
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_5628_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6930..7901
DNA (972bp) protein (324aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_5628_11
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8066..9331
DNA (1266bp) protein (422aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b2_sep16_scaffold_5628_12
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9666..10334
DNA (669bp) protein (223aa)
Probable nicotinate-nucleotide adenylyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nadD; nicotinate/nicotinamide mononucleotide adenylyltransferase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 12 items

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