ggKbase home page

PLM3-1_170_b2_sep16_scaffold_1224_9

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(10262..11404)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 380.0
  • Bit_score: 366
  • Evalue 2.00e-98
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 390.0
  • Bit_score: 220
  • Evalue 4.90e-55
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 376.0
  • Bit_score: 518
  • Evalue 4.30e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGACGGTGAAAAAAGGCATTGTTCTGGCATGCATTCTGATCGTCGCCGTTCTCCTGGGAACGGGCTATGCGCTTTGGAACATGATCGGCATCAAAGGCTCGATCGTCATTTCCGGGATCATCGAAGCGGACGATATCCATGTGGGCTCGAAGGTCGGAGGGCGCGTGCTAAAAGTCGTCGCTCGCGAAGGCCAAACCGTCAAAGCGGGCGAGGTGTTGGTCTTGCTCGAGCCGAGGGAGCCGGAAGCCTCGTTGGCAGAGGCGCAAGCGACCATGCGCCAGGCCCAGGCCAAGCTGGCGCTGTTGTCCTCCGGCTATCGCCAGGAGGAAATCGAACAGGGAGAAGCCGGGGTGAAACAGAGCCAGGCCGAGTTGAGCCAGTTGGTCGCGGGTCCGCGCCAGCAGGAAATCGATCAGGCGCGCGCCGACTGGCTGGCGGCAAAGGCGCAGGCGGAAAATTCTCGCAAACTTCAGCGGCGCATGGAGGATTTGTCGAAGCGCGATCTCATCGCCAAGCAGGACTTCGATGACGCCCAGGCCAAAGCCGAAGAATCCGAGCAGAAGATGAAATCCGCGCGGGAGCGTTACGACCTGGTGCTGGCCGGGACGCGCACGGAGGAAATCGAGCGGGCGCGACAGCGCCTGGCGGAGGCCGAGGCGAAGCTGCGCCAGTTGAAGAGCGGATATCGCAAGGAAGAGGTGGCGCAAGCCAAATCGGAGGTCGAAGCGGCGCGGGCCCGAGTGGAATTGACTCGCACCCAGCTCGACGAGACCGTGATCAAAGCGCCGGTGGACGCCGTCGTCGAAATCTTGGACCTCGAACCCGGCGACCTAGTGGGCGCGGGCAAACCCGTGGCCACGCTGCTGCGGACCAACAGCCTATGGGTGCGCGCTTACCTGCCCGAGGCCAAGCTCGGTTTTGTTAAAACCGGCGCGAAGGTGACGGTGCGCGTCGATTCATTCCCCCATCGTGATTTCGCCGGTATCGTGCGTCGGGTGAGCCGCCAGGCCGAGTTCACGCCGCGCAACGTGCAGACCTGGGAAGAGCGCGTGCTGCAAGTTTTCCAGACGGAAGTCGTCATCGACGATCCCGAACAAGTCTTGCGCCCGGGCATGAACGCCGACGTGACCATCTCAAAATAG
PROTEIN sequence
Length: 381
MTVKKGIVLACILIVAVLLGTGYALWNMIGIKGSIVISGIIEADDIHVGSKVGGRVLKVVAREGQTVKAGEVLVLLEPREPEASLAEAQATMRQAQAKLALLSSGYRQEEIEQGEAGVKQSQAELSQLVAGPRQQEIDQARADWLAAKAQAENSRKLQRRMEDLSKRDLIAKQDFDDAQAKAEESEQKMKSARERYDLVLAGTRTEEIERARQRLAEAEAKLRQLKSGYRKEEVAQAKSEVEAARARVELTRTQLDETVIKAPVDAVVEILDLEPGDLVGAGKPVATLLRTNSLWVRAYLPEAKLGFVKTGAKVTVRVDSFPHRDFAGIVRRVSRQAEFTPRNVQTWEERVLQVFQTEVVIDDPEQVLRPGMNADVTISK*