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PLM3_127_b1_sep16_scaffold_2638

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_2638_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1..720
DNA (720bp) protein (240aa)
KpsF/GutQ family protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
D-arabinose 5-phosphate isomerase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b1_sep16_scaffold_2638_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

729..1268
DNA (540bp) protein (180aa)
3-deoxy-manno-octulosonate-8-phosphatase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b1_sep16_scaffold_2638_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1370..1996
DNA (627bp) protein (209aa)
id=1759803 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_127_b1_sep16_scaffold_2638_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1998..2552
DNA (555bp) protein (185aa)
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lipopolysaccharide transport periplasmic protein LptA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_2638_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2555..3277
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter ATP-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b1_sep16_scaffold_2638_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3280..4755
DNA (1476bp) protein (492aa)
RNA polymerase sigma-54 factor bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rpoN; RNA polymerase sigma-54 factor RpoN
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_2638_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4778..5095
DNA (318bp) protein (106aa)
Ribosomal subunit interface protein bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pseudouridine synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_127_b1_sep16_scaffold_2638_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5553
DNA (462bp) protein (154aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b1_sep16_scaffold_2638_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5560..6426
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein COCOR_07137 bin=GWD2_Deltaproteobacteria_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b1_sep16_scaffold_2638_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6430..6705
DNA (276bp) protein (92aa)
Phosphotransferase system, phosphocarrier protein HPr bin=GWD2_Deltaproteobacteria_55_8 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phosphotransferase system HPr (HPr) family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_127_b1_sep16_scaffold_2638_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6782..7957
DNA (1176bp) protein (392aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_127_b1_sep16_scaffold_2638_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7987..8664
DNA (678bp) protein (226aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

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