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PLM3_127_b1_sep16_scaffold_19679

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_19679_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2..2017
DNA (2016bp) protein (672aa)
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBE67609.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA-directed RNA polymerase subunit beta' Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK26_9BACT
PLM3_127_b1_sep16_scaffold_19679_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2091..2468
DNA (378bp) protein (126aa)
30S ribosomal protein S12 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK27_9BACT
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_19679_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2573..3043
DNA (471bp) protein (157aa)
30S ribosomal protein S7 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK28_9BACT
rpsG; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_19679_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3234..3473
DNA (240bp) protein (80aa)
Elongation factor G Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK29_9BACT
fusA; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_19679_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3488..5164
DNA (1677bp) protein (559aa)
Elongation factor G Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK29_9BACT
fusA; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_19679_6
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5199..6221
DNA (1023bp) protein (341aa)
Elongation factor Tu {ECO:0000313|EMBL:ESW91462.1}; EC=3.6.5.3 {ECO:0000313|EMBL:ESW91462.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
UPI0003CDF0C6 related cluster Tax=unknown RepID=UPI0003CDF0C6
tuf; elongation factor Tu
PLM3_127_b1_sep16_scaffold_19679_7
R_NC10_66_22, NC10, Bacteria

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6492..6641
DNA (150bp) protein (50aa)
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 bin=bin3_NC10 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L33
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_127_b1_sep16_scaffold_19679_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6839..7315
DNA (477bp) protein (159aa)
Protein translocase subunit SecE Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK19_9BACT
secE; preprotein translocase subunit secE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_19679_trna_1
unknown

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6864..6936
DNA (73bp)
transferRNA Trp
PLM3_127_b1_sep16_scaffold_19679_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7346..7477
DNA (132bp) protein (44aa)
Transcription termination/antitermination protein NusG Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK20_9BACT
nusG; component in transcription antitermination
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 10 items

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