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PLM3_127_b1_sep16_scaffold_62488

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_62488_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(107..1285)
DNA (1179bp) protein (393aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68601.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3_127_b1_sep16_scaffold_62488_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(1372..1776)
DNA (405bp) protein (135aa)
DnaK suppressor protein; K06204 DnaK suppressor protein bin=CNBR_ACIDO species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_127_b1_sep16_scaffold_62488_3
unknown

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comp(1902..2162)
DNA (261bp) protein (87aa)

This feature has no annotations

PLM3_127_b1_sep16_scaffold_62488_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2495..2755)
DNA (261bp) protein (87aa)
gltK1; protein GltK1; K10002 glutamate/aspartate transport system permease protein bin=bin3_NC10 species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
polar amino acid ABC transporter inner membrane subunit
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3_127_b1_sep16_scaffold_62488_5
CSP1_5_NC10, NC10, Bacteria

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comp(2752..2991)
DNA (240bp) protein (80aa)
gltK1; protein GltK1; K10002 glutamate/aspartate transport system permease protein bin=bin3_NC10 species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
polar amino acid ABC transporter, inner membrane subunit
Tax=CSP1_5_NC10
PLM3_127_b1_sep16_scaffold_62488_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2988..3599)
DNA (612bp) protein (204aa)
GltJ1 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltJ; glutamate/aspartate ABC transporter inner membrane protein GltJ
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b1_sep16_scaffold_62488_7
CSP1_5_NC10, NC10, Bacteria

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comp(3610..4467)
DNA (858bp) protein (286aa)
gltB1; protein GltB1 (EC:1.4.1.13); K10001 glutamate/aspartate transport system substrate-binding protein bin=bin3_NC10 species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
gltB1; protein GltB1 (EC:1.4.1.13)
Tax=CSP1_5_NC10
PLM3_127_b1_sep16_scaffold_62488_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4534..4917)
DNA (384bp) protein (128aa)
ABC transporter bin=bin3_NC10 species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
amino acid ABC transporter ATPase
Tax=CSP1_5_NC10
Displaying 8 items

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