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PLM3_127_b1_sep16_scaffold_8635

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_8635_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3..1634
DNA (1632bp) protein (544aa)
ilvI; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
ilvB; acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8635_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1644..2228
DNA (585bp) protein (195aa)
acetolactate synthase, small subunit bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
acetolactate synthase, small subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8635_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2268..3272
DNA (1005bp) protein (335aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Ketol-acid reductoisomerase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8635_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3301..3927
DNA (627bp) protein (209aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_8635_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3924..4781
DNA (858bp) protein (286aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CDP-diacylglycerol--serine O-phosphatidyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_8635_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4783..5019
DNA (237bp) protein (79aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 6 items

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