ggKbase home page

PLM3_127_b1_sep16_scaffold_9795

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_9795_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3..332
DNA (330bp) protein (110aa)
S-adenosylhomocysteine deaminase bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_9795_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(322..1047)
DNA (726bp) protein (242aa)
Sporulation domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP3_ANADF
sporulation domain-containing protein
Sporulation domain protein {ECO:0000313|EMBL:ABS26489.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3_127_b1_sep16_scaffold_9795_3
unknown

Not on your lists

1298..1405
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_127_b1_sep16_scaffold_9795_4
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1409..2245
DNA (837bp) protein (279aa)
fabG2; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase Tax=Ralstonia sp. GA3-3 RepID=R7XN66_9RALS
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EON20490.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
PLM3_127_b1_sep16_scaffold_9795_5
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2363..2809)
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Ribonuclease H Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5L6_DESAP
ribonuclease H
PLM3_127_b1_sep16_scaffold_9795_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2907..3614)
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_9795_trna_1
unknown

Not on your lists

comp(3695..3767)
DNA (73bp)
transferRNA Met
PLM3_127_b1_sep16_scaffold_9795_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3791..4732)
DNA (942bp) protein (314aa)
RNA polymerase sigma factor RpoD bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RpoD family RNA polymerase sigma-70 subunit
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 8 items

View Taxonomy