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PLM3_127_b1_sep16_scaffold_5730

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_5730_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..800)
DNA (798bp) protein (266aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_5730_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(805..1647)
DNA (843bp) protein (281aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b1_sep16_scaffold_5730_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1644..2321)
DNA (678bp) protein (226aa)
id=3526414 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_5730_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2622..3227)
DNA (606bp) protein (202aa)
Coenzyme A pyrophosphatase bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
DNA mismatch repair protein MutT
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_5730_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3310..4077)
DNA (768bp) protein (256aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77)
2-hydroxypent-2,4-dienoate hydratase (Protein belongs to CMGI-2) bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_5730_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4074..4862)
DNA (789bp) protein (263aa)
sat:SYN_01020 Sir2 family NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sir2 family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b1_sep16_scaffold_5730_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4859..5218)
DNA (360bp) protein (120aa)
id=4117858 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_127_b1_sep16_scaffold_5730_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5281..5415)
DNA (135bp) protein (45aa)
Propanoyl-CoA C-acyltransferase bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_5730_9
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5458..6048)
DNA (591bp) protein (197aa)
TRAP-type C4-dicarboxylate transport system, large permease component bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP dicarboxylate transporter DctM subunit
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
Displaying 9 items

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