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PLM3_127_b1_sep16_scaffold_18456

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_18456_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..985
DNA (984bp) protein (328aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
livM; branched chain amino acid ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_18456_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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985..1212
DNA (228bp) protein (76aa)
Hypothetical conserved protein bin=GWA2_Methylomirabilis_73_35 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3_127_b1_sep16_scaffold_18456_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1152..1736
DNA (585bp) protein (195aa)
Inner-membrane translocator bin=GWC2_Methylomirabilis_70_16 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_18456_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1733..3676
DNA (1944bp) protein (648aa)
Putative branched chain amino acid ABC transporter substrate-binding protein bin=GWC2_Methylomirabilis_70_16 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_127_b1_sep16_scaffold_18456_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3651..4400
DNA (750bp) protein (250aa)
High-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_127_b1_sep16_scaffold_18456_6
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4427..5317
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold protein Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0V252_MYCFO
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase {ECO:0000313|EMBL:CDO20242.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
alpha/beta hydrolase
PLM3_127_b1_sep16_scaffold_18456_7
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5332..5931)
DNA (600bp) protein (200aa)
NUDIX hydrolase Tax=Marichromatium purpuratum 984 RepID=F9TYR0_MARPU
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AHF02772.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
PLM3_127_b1_sep16_scaffold_18456_8
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5949..6146)
DNA (198bp) protein (66aa)
small terminal subunit of phenylpropionate dioxygenase (EC:1.14.12.19)
Biphenyl 2,3-dioxygenase beta subunit Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WTH1_9NOCA
Biphenyl 2,3-dioxygenase beta subunit {ECO:0000313|EMBL:EOM78548.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
Displaying 8 items

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