ggKbase home page

PLM3_127_b1_sep16_scaffold_10178

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b1_sep16_scaffold_10178_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1..1530
DNA (1530bp) protein (510aa)
Indolepyruvate ferredoxin oxidoreductase, alpha subunit bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
indolepyruvate ferredoxin oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3_127_b1_sep16_scaffold_10178_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1530..3074
DNA (1545bp) protein (515aa)
Putative indolepyruvate oxidoreductase subunit B bin=GWC2_Methylomirabilis_70_24 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_10178_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3082..3804
DNA (723bp) protein (241aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA dehydratase EchA8_3 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_10178_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3767..4129)
DNA (363bp) protein (121aa)
Transcriptional regulator, HxlR family Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVT0_PARL1
HxlR family transcriptional regulator {ECO:0000313|EMBL:GAK46677.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
HxlR family transcriptional regulator
PLM3_127_b1_sep16_scaffold_10178_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4498..5820)
DNA (1323bp) protein (441aa)
Major facilitator superfamily MFS_1 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_127_b1_sep16_scaffold_10178_6
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5868..6602)
DNA (735bp) protein (245aa)
Coenzyme A transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH88_9CHLR
hypothetical protein
Tax=CG_Syntroph_01
PLM3_127_b1_sep16_scaffold_10178_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6626..7741)
DNA (1116bp) protein (372aa)
menC; L-alanine-DL-glutamate epimerase (EC:4.2.1.-)
L-Alanine-DL-glutamate epimerase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_127_b1_sep16_scaffold_10178_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7750..8283)
DNA (534bp) protein (178aa)
3-oxoadipate CoA-transferase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH87_9CHLR
3-oxoadipate:succinyl-CoA transferase subunit A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 8 items

View Taxonomy