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PLM4_32_coex_redo_sep16_scaffold_1048

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1048_1
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(46..2478)
DNA (2433bp) protein (811aa)
TonB-dependent receptor Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SRN9_BACT6
Uncharacterized protein {ECO:0000313|EMBL:KIA96896.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent receptor
PLM4_32_coex_redo_sep16_scaffold_1048_2
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2570..3877)
DNA (1308bp) protein (436aa)
Signal transduction histidine kinase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Signal transduction histidine kinase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM4_32_coex_redo_sep16_scaffold_1048_3
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3879..5144)
DNA (1266bp) protein (422aa)
TPR repeat protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APC5_IGNAJ
hypothetical protein
Tax=CG_Ignavi_02
PLM4_32_coex_redo_sep16_scaffold_1048_4
unknown

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comp(5160..5756)
DNA (597bp) protein (199aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1048_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6034..7449)
DNA (1416bp) protein (472aa)
Response regulator Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGJ2_IGNAJ
response regulator
Response regulator {ECO:0000313|EMBL:AFH48099.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM4_32_coex_redo_sep16_scaffold_1048_6
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7446..10292)
DNA (2847bp) protein (949aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y0V0_SORCE
photosystem I assembly protein Ycf3
Tax=BJP_IG2102_Ignavibacteriales_35_8
PLM4_32_coex_redo_sep16_scaffold_1048_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10460..11122)
DNA (663bp) protein (221aa)
Serine/threonine protein kinase bin=GWF2_WWE1_40_14 species=Picrophilus torridus genus=Picrophilus taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF2_WWE1_40_14 organism_group=WWE1
Ser/Thr protein kinase
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM4_32_coex_redo_sep16_scaffold_1048_8
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11119..11982)
DNA (864bp) protein (288aa)
Oligopeptide ABC transporter permease protein Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBV7_KETVW
gsiD; Oligopeptide ABC transporter permease protein
Oligopeptide ABC transporter permease protein {ECO:0000313|EMBL:AEM42859.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
PLM4_32_coex_redo_sep16_scaffold_1048_9
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(11979..12947)
DNA (969bp) protein (323aa)
Peptide ABC transporter, permease protein Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KBZ9_CHLTE
peptide ABC transporter permease
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:AAM72856.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
PLM4_32_coex_redo_sep16_scaffold_1048_10
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(12957..14696)
DNA (1740bp) protein (580aa)
Extracellular solute-binding protein family 5 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSQ2_CHLT3
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACF14099.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
PLM4_32_coex_redo_sep16_scaffold_1048_11
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14887..15786
DNA (900bp) protein (300aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0W3_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EKP94544.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
peptide ABC transporter atpase
Displaying 11 items

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