ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_11268

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_11268_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..968)
DNA (966bp) protein (322aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
DNA primase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8S4_GEOUR
DNA primase
PLM4_32_coex_redo_sep16_scaffold_11268_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(995..1504)
DNA (510bp) protein (170aa)
Colicin V production protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8S5_GEOUR
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ABQ28193.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_32_coex_redo_sep16_scaffold_11268_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1618..2061)
DNA (444bp) protein (148aa)
GatB/Yqey domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8S6_GEOUR
GatB/Yqey domain-containing protein
GatB/Yqey domain protein {ECO:0000313|EMBL:ABQ28194.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_32_coex_redo_sep16_scaffold_11268_4
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2073..2270)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 Tax=Bacteria RepID=RS21_GEOBB
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PLM4_32_coex_redo_sep16_scaffold_11268_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2400..2738)
DNA (339bp) protein (113aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phosphoribosyl-ATP pyrophosphatase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8S8_GEOUR
hisE; phosphoribosyl-ATP pyrophosphatase
PLM4_32_coex_redo_sep16_scaffold_11268_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2808..3569)
DNA (762bp) protein (254aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; Short=IGPS subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Imidazole glycerol phosphate synthase subunit HisF Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=HIS6_GEODF
imidazole glycerol phosphate synthase subunit HisF
PLM4_32_coex_redo_sep16_scaffold_11268_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3633..4370)
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=HIS4_GEOUR
PLM4_32_coex_redo_sep16_scaffold_11268_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4461..5087)
DNA (627bp) protein (209aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Imidazole glycerol phosphate synthase subunit HisH Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8T1_GEOUR
hisH; imidazole glycerol phosphate synthase subunit HisH
Displaying 8 items

View Taxonomy