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PLM3-1_200_b1_sep16_scaffold_5462

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_5462_1
unknown

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comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_5462_trna_3
unknown

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comp(207..293)
DNA (87bp)
transferRNA Ser
PLM3-1_200_b1_sep16_scaffold_5462_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(318..767)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRM8_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_5462_trna_2
unknown

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comp(840..928)
DNA (89bp)
transferRNA Ser
PLM3-1_200_b1_sep16_scaffold_5462_trna_1
unknown

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comp(1194..1276)
DNA (83bp)
transferRNA Ser
PLM3-1_200_b1_sep16_scaffold_5462_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1369..2670)
DNA (1302bp) protein (434aa)
serS; Seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBE70017.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Serine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW0_9BACT
PLM3-1_200_b1_sep16_scaffold_5462_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2792..3355)
DNA (564bp) protein (188aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBE70018.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA gyrase subunit A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW1_9BACT
Suspect SCG annotation. See neighboring gene [PLM3-1_200_b1_sep16_scaffold_5462_5].
PLM3-1_200_b1_sep16_scaffold_5462_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3324..5336)
DNA (2013bp) protein (671aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBE70018.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW1_9BACT
PLM3-1_200_b1_sep16_scaffold_5462_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

5641..6345
DNA (705bp) protein (235aa)
Methyltransferase gidB (Glucose-inhibited division protein B) (EC:2.1.-.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ribosomal RNA small subunit methyltransferase G Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW9_9BACT
PLM3-1_200_b1_sep16_scaffold_5462_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6405..7220
DNA (816bp) protein (272aa)
Chromosome partitioning protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX0_9BACT
parA; chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:CBE70027.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_5462_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

7186..7983
DNA (798bp) protein (266aa)
Chromosome partitioning protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX1_9BACT
parB; chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:CBE70028.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 11 items

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