ggKbase home page

PLM3-1_200_b1_sep16_scaffold_624

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_624_1
unknown

Not on your lists

671..1159
DNA (489bp) protein (163aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_624_2
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

1207..1788
DNA (582bp) protein (194aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI000375E613
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM3-1_200_b1_sep16_scaffold_624_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1815..4871
DNA (3057bp) protein (1019aa)
Citrate (pro-3S)-lyase (EC:4.1.3.6)
MaoC domain protein dehydratase bin=bin3_NC10 species=Natrinema pallidum genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_200_b1_sep16_scaffold_624_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4941..5396
DNA (456bp) protein (152aa)
Putative PAS/PAC sensor protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LN43_SYNFM
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABK18845.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM3-1_200_b1_sep16_scaffold_624_5
unknown

Not on your lists

comp(5546..5986)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_624_6

Not on your lists

6066..6974
DNA (909bp) protein (303aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037AA8E0
Marine sediment metagenome DNA, contig: S12H4_L01896 {ECO:0000313|EMBL:GAI77411.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
6-phosphogluconate dehydrogenase
PLM3-1_200_b1_sep16_scaffold_624_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7055..7339)
DNA (285bp) protein (95aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5EADC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_200_b1_sep16_scaffold_624_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7871..8599
DNA (729bp) protein (243aa)
molybdopterin binding domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin binding domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_624_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8781..10562)
DNA (1782bp) protein (594aa)
ABC-type multidrug/protein/lipid transport system, ATPase component Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI2_9BACT
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
ABC-type multidrug/protein/lipid transport system, ATPase component {ECO:0000313|EMBL:CBE69567.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_624_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(10559..12259)
DNA (1701bp) protein (567aa)
ABC transporter, ATPase subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJI3_9BACT
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:CBE69568.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 10 items

View Taxonomy