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PLM3-1_200_b1_sep16_scaffold_643

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_643_1
R_NC10_66_22, NC10, Bacteria

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comp(2..466)
DNA (465bp) protein (155aa)
Sigma-54-dependent transcriptional response regulator bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_200_b1_sep16_scaffold_643_2
R_NC10_66_22, NC10, Bacteria

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comp(445..2706)
DNA (2262bp) protein (754aa)
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] bin=bin3_NC10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_200_b1_sep16_scaffold_643_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2993..3913)
DNA (921bp) protein (307aa)
lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY4_9BACT
PLM3-1_200_b1_sep16_scaffold_643_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4157..4657)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69825.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_643_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4751..5116)
DNA (366bp) protein (122aa)
RNase H Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY6_9BACT
rnhA; RNase H
RNase H {ECO:0000313|EMBL:CBE69826.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_643_6
unknown

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5163..5543
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_643_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(5358..6062)
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69827.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_643_trna_1
unknown

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comp(6211..6284)
DNA (74bp)
transferRNA Met
PLM3-1_200_b1_sep16_scaffold_643_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(6404..8467)
DNA (2064bp) protein (688aa)
RNA polymerase sigma factor SigA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY8_9BACT
rpoD; RNA polymerase sigma factor rpoD (Sigma-80)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_643_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8481..10280)
DNA (1800bp) protein (600aa)
DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA primase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKY9_9BACT
PLM3-1_200_b1_sep16_scaffold_643_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(10297..12435)
DNA (2139bp) protein (713aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Endonuclease MutS2 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKZ0_9BACT
MutS2 protein
Displaying 11 items

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