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PLM3-1_200_b1_sep16_scaffold_954

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_954_1
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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1..123
DNA (123bp) protein (41aa)
Branched-chain amino acid ABC transporter, ATP-binding protein Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PD63_DEFDS
branched-chain amino acid ABC transporter ATP-binding protein
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAI80536.1}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC; 101012 / SSM1).;"
PLM3-1_200_b1_sep16_scaffold_954_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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95..1330
DNA (1236bp) protein (412aa)
Extracellular ligand-binding receptor Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC5_9BACT
Extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CBE68454.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_954_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1285..1986
DNA (702bp) protein (234aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000375B796
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68453.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_954_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2081..4219
DNA (2139bp) protein (713aa)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp synthetase I) ((P)ppGpp synthetase) {ECO:0000313|EMBL:CBE68452.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CBE68452.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp synthetase I) ((P)ppGpp synthetase) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFC3_9BACT
PLM3-1_200_b1_sep16_scaffold_954_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4555..5112
DNA (558bp) protein (186aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000377E569
yhhF; methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:CBE68450.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_954_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5109..5621
DNA (513bp) protein (171aa)
coaD; phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
phosphopantetheine adenylyltransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003741030
PLM3-1_200_b1_sep16_scaffold_954_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5618..6820
DNA (1203bp) protein (401aa)
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
Aspartate aminotransferase A (AspAT) {ECO:0000313|EMBL:CBE68448.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CBE68448.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Aspartate aminotransferase A (AspAT) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB9_9BACT
PLM3-1_200_b1_sep16_scaffold_954_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6946..8325
DNA (1380bp) protein (460aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003814B88
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_954_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8345..9310
DNA (966bp) protein (322aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00035C7BFB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE03457.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM3-1_200_b1_sep16_scaffold_954_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9307..9585
DNA (279bp) protein (93aa)
DNA-binding protein HU (DNA-binding protein II) (HB) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB3_9BACT
hup; DNA-binding protein HU (DNA-binding protein II) (HB)
DNA-binding protein HU (DNA-binding protein II) (HB) {ECO:0000313|EMBL:CBE68442.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_954_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9602..10024
DNA (423bp) protein (141aa)
Uncharacterized HTH-type transcriptional regulator in himA 3'region (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB2_9BACT
hypothetical protein
Uncharacterized HTH-type transcriptional regulator in himA 3'region (Modular protein) {ECO:0000313|EMBL:CBE68441.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_954_trna_1
unknown

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10044..10117
DNA (74bp)
transferRNA Pro
PLM3-1_200_b1_sep16_scaffold_954_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10204..10368
DNA (165bp) protein (55aa)
surE; 5'-nucleotidase surE (Nucleoside 5'-monophosphate phosphohydrolase)(survival protein, protein damage control) (EC:3.1.3.5)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060, ECO:0000313|EMBL:CBE68440.1};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
5'-nucleotidase SurE Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFB1_9BACT
Displaying 13 items

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