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PLM3-1_200_b1_sep16_scaffold_1528

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1528_1
unknown

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2..133
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_1528_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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301..3894
DNA (3594bp) protein (1198aa)
Chromosome partition protein Smc Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFF3_9BACT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Chromosome partition protein smc
PLM3-1_200_b1_sep16_scaffold_1528_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3913..4857
DNA (945bp) protein (315aa)
Signal recognition particle receptor FtsY Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFF4_9BACT
ftsY; cell division transporter substrate-binding protein FtsY (Signal recognition particle receptor)
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4957..6075
DNA (1119bp) protein (373aa)
ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFF5_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6085..6735
DNA (651bp) protein (217aa)
ribC; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain {ECO:0000313|EMBL:CBE68487.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CBE68487.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Riboflavin synthase alpha chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFF6_9BACT
PLM3-1_200_b1_sep16_scaffold_1528_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6756..7970
DNA (1215bp) protein (405aa)
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase (EC:3.5.4.25 4.1.99.12)
Riboflavin biosynthesis protein RibBA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFF7_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8521..8952
DNA (432bp) protein (144aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI0003643524
nusB; N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9072..10307)
DNA (1236bp) protein (412aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-oxoacyl-ACP synthase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035F9664
PLM3-1_200_b1_sep16_scaffold_1528_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(10360..10605)
DNA (246bp) protein (82aa)
Acyl carrier protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFG3_9BACT
acyl carrier protein (ACP)
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(10645..11397)
DNA (753bp) protein (251aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBE68495.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBE68495.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-ketoacyl-ACP reductase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037432FA
PLM3-1_200_b1_sep16_scaffold_1528_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(11397..12338)
DNA (942bp) protein (314aa)
fabD; Malonyl CoA-acyl carrier protein transacylase (MCT) (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBE68496.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ACP S-malonyltransferase Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000371B74B
PLM3-1_200_b1_sep16_scaffold_1528_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(12361..13344)
DNA (984bp) protein (328aa)
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III)(KAS III) (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFG6_9BACT
PLM3-1_200_b1_sep16_scaffold_1528_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(13361..14359)
DNA (999bp) protein (333aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphate acyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFG7_9BACT
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain
PLM3-1_200_b1_sep16_scaffold_1528_14
CSP1_5_NC10, NC10, Bacteria

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comp(14390..14572)
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
rpmF; 50S ribosomal protein L32
Tax=CSP1_5_NC10
PLM3-1_200_b1_sep16_scaffold_1528_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(14599..15108)
DNA (510bp) protein (170aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037D42CF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68500.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_200_b1_sep16_scaffold_1528_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(15200..15481)
DNA (282bp) protein (94aa)
ndk; nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase) (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000313|EMBL:CBE68501.1};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Nucleoside diphosphate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFH0_9BACT
Displaying 16 items

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