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PLM3-1_200_b1_sep16_scaffold_844

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_844_1
unknown

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1..93
DNA (93bp) protein (31aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_844_trna_1
unknown

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1..86
DNA (86bp)
transferRNA Ser
PLM3-1_200_b1_sep16_scaffold_844_trna_2
unknown

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193..281
DNA (89bp)
transferRNA Ser
PLM3-1_200_b1_sep16_scaffold_844_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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411..1121
DNA (711bp) protein (237aa)
Helix-turn-helix transcriptional regulator, GntR family bin=GWB2_Proteobacteria_55_19 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_844_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1118..2092
DNA (975bp) protein (325aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_844_4
unknown

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2092..2475
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_844_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2577..3644
DNA (1068bp) protein (356aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_844_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3750..4910
DNA (1161bp) protein (387aa)
Luciferase-like monooxygenase Tax=Haloarcula japonica DSM 6131 RepID=M0L3I1_HALJP
Luciferase-like monooxygenase {ECO:0000313|EMBL:EMA26989.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
luciferase
PLM3-1_200_b1_sep16_scaffold_844_7
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4920..5648
DNA (729bp) protein (243aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
pyrroloquinoline quinone biosynthesis protein PqqC Tax=Nocardiopsis salina RepID=UPI0003473ADE
pyrroloquinoline quinone biosynthesis protein PqqC
PLM3-1_200_b1_sep16_scaffold_844_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5667..6770
DNA (1104bp) protein (368aa)
Reactivating factor for ethanolamine ammonia lyase Tax=Marinobacter algicola DG893 RepID=A6F539_9ALTE
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_844_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6783..8333
DNA (1551bp) protein (517aa)
Extracellular solute-binding protein family 5 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_200_b1_sep16_scaffold_844_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8499..9929
DNA (1431bp) protein (477aa)
UbiD family decarboxylases bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3-1_200_b1_sep16_scaffold_844_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10164..11693
DNA (1530bp) protein (510aa)
Flp pilus secretin RcpA Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EAZ0_GEOBB
cpaC-2; Flp pilus assembly secretin CpaC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_844_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11783..12211
DNA (429bp) protein (143aa)
Response regulator receiver protein Tax=Geobacter sp. M18 RepID=C6MUN1_9DELT bin=ACD20 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 14 items

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