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PLM3-1_200_b1_sep16_scaffold_28358

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_28358_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_28358_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(388..648)
DNA (261bp) protein (87aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_200_b1_sep16_scaffold_28358_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(641..925)
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_200_b1_sep16_scaffold_28358_4
unknown

Not on your lists

comp(940..1131)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_28358_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1148..1459)
DNA (312bp) protein (104aa)
integron integrase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integrase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_200_b1_sep16_scaffold_28358_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..2587)
DNA (801bp) protein (267aa)
Amino acid ABC transporter substrate-binding protein, PAAT family Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GU2_POLSJ
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_28358_7
unknown

Not on your lists

comp(2618..2755)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_28358_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2718..3281)
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DGS9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL13473.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3-1_200_b1_sep16_scaffold_28358_9
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(3536..3826)
DNA (291bp) protein (97aa)
Transposase Tax=uncultured bacterium pFosPlaG RepID=B0FB20_9BACT
transposase
Tax=CG_Nitrosp_02
PLM3-1_200_b1_sep16_scaffold_28358_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4382..4699
DNA (318bp) protein (106aa)
hypothetical protein Tax=Clostridium tyrobutyricum RepID=UPI00030E8464
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_28358_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4797..5303
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGV6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_28358_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5377..5799)
DNA (423bp) protein (141aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHK8_THEYD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_28358_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6213..6473
DNA (261bp) protein (87aa)
ABC-type Fe3+ transport system periplasmic component Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JPV8_AGRRK
ABC-type Fe3+ transport system periplasmic component
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 13 items

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