ggKbase home page

PLM3-1_200_b1_sep16_scaffold_2387_17

Organism: PLM6_200_b1_sep16_Deltaproteobacteria_56_19

near complete RP 42 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 11464..11646

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC Tax=Rhodospirillum rubrum RepID=G2TEA8_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 47.0
  • Bit_score: 57
  • Evalue 5.20e-06
PilT protein-like protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 47.0
  • Bit_score: 57
  • Evalue 1.50e-06
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 60.0
  • Bit_score: 87
  • Evalue 6.60e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_13_41_11 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 183
GTGGCAGTTATCTCCATGGACTCGCGTATCGCACGCCTGGCCGCTTTCATTCGGAGACAACACCGGCTCAAGGTCCCAGATAGTATAATTGCCGCTACCGCGCTGTTCACCGGCAGCACCTTGCTGACGCGCAACACCCGAGACTTCCGAAGGATTCCGAATCTCTCCCTGCTTAAGGTTTGA
PROTEIN sequence
Length: 61
VAVISMDSRIARLAAFIRRQHRLKVPDSIIAATALFTGSTLLTRNTRDFRRIPNLSLLKV*