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PLM3-1_200_b1_sep16_scaffold_2387

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_2387_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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3..170
DNA (168bp) protein (56aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1K8_CALAS
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99145.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_200_b1_sep16_scaffold_2387_2
unknown

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312..503
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2387_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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678..1760
DNA (1083bp) protein (361aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_2387_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1774..3225
DNA (1452bp) protein (484aa)
Putative ethanolamine utilisation protein EutA bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
eutA; Ethanolamine utilization protein eutA
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2387_5
unknown

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comp(3183..3344)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2387_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3500..3913
DNA (414bp) protein (138aa)
prevent-host-death family protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
antitoxin, Phd family
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_2387_7
unknown

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comp(3879..4019)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2387_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4274..4516
DNA (243bp) protein (81aa)
Transcriptional regulator/antitoxin, MazE bin=GWC2_Proteo_65_14_Ab886 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
SpoVT/AbrB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2387_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4516..4863
DNA (348bp) protein (116aa)
MazE/toxin transcriptional modulator MazF; K07171 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
transcriptional modulator of MazE/toxin MazF
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2387_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5032..5259
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Dactylococcopsis salina PCC 8305 RepID=K9YQ23_DACSA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_2387_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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5256..5516
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1F1_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ92704.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_200_b1_sep16_scaffold_2387_12
unknown

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5787..6365
DNA (579bp) protein (193aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2387_13
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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6370..10020
DNA (3651bp) protein (1217aa)
recD2; ATP-dependent RecD-like DNA helicase (EC:3.6.4.12)
RecD2 protein {ECO:0000313|EMBL:AIZ56944.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIZ56944.1};; species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
hypothetical protein Tax=Methanothermococcus thermolithotrophicus RepID=UPI00036BED78
PLM3-1_200_b1_sep16_scaffold_2387_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10406..10603
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_2387_15
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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10650..11195
DNA (546bp) protein (182aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM3-1_200_b1_sep16_scaffold_2387_16
unknown

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comp(11192..11407)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_2387_17
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

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11464..11646
DNA (183bp) protein (61aa)
Ribonuclease VapC Tax=Rhodospirillum rubrum RepID=G2TEA8_RHORU
PilT protein-like protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
PLM3-1_200_b1_sep16_scaffold_2387_18
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11828..12250
DNA (423bp) protein (141aa)
Rieske (2Fe-2S) iron-sulfur domain protein Tax=Marichromatium purpuratum 984 RepID=F9TXB2_MARPU
(2Fe-2S)-binding protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AHF04747.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
PLM3-1_200_b1_sep16_scaffold_2387_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12247..12690
DNA (444bp) protein (148aa)
Rieske (2Fe-2S) oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN76_KORVE
Rieske (2Fe-2S) oxidoreductase
Rieske (2Fe-2S) oxidoreductase {ECO:0000313|EMBL:ABF41674.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_200_b1_sep16_scaffold_2387_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..13787
DNA (1107bp) protein (369aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2387_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

13797..14717
DNA (921bp) protein (307aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_200_b1_sep16_scaffold_2387_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14744..15712
DNA (969bp) protein (323aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000370EECD
prpB; cadidate carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_200_b1_sep16_scaffold_2387_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15730..15957)
DNA (228bp) protein (76aa)
Lipoprotein, putative bin=GWB2_Desulfobacterales_56_26 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2387_24
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16068..16757)
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9H4X3_9PROT
peptidase S16, lon-like protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_200_b1_sep16_scaffold_2387_25
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16870..17421
DNA (552bp) protein (184aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_200_b1_sep16_scaffold_2387_26
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17628..18191)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrB bin=GWD2_Deltaproteobacteria_55_8 species=gamma proteobacterium NOR5-3 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 26 items

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