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PLM3-1_200_b1_sep16_scaffold_9495

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_9495_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3..1367
DNA (1365bp) protein (455aa)
Putative aminopeptidase bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
putative aminopeptidase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1570..1986
DNA (417bp) protein (139aa)
BadM/Rrf2 family transcriptional regulator bin=bin1_lowGC species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin1_lowGC organism_group=Unknown_CP
Rrf2 family winged helix-turn-helix transcriptional regulator
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2024..3424
DNA (1401bp) protein (467aa)
sufB; Fe-S cluster assembly protein SufB; K09014 Fe-S cluster assembly protein SufB bin=bin1_lowGC species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
ycf24; cysteine desulfurase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3486..4256
DNA (771bp) protein (257aa)
sufC; Fe-S cluster assembly ATP-binding protein SufC; K09013 Fe-S cluster assembly ATP-binding protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
sufC; Fe-S cluster assembly ATP-binding protein SufC
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4271..5086
DNA (816bp) protein (272aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
FeS assembly protein SufD
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_6
CSP1_5_NC10, NC10, Bacteria

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5091..5531
DNA (441bp) protein (147aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
FeS assembly protein SufD
Tax=CSP1_5_NC10
PLM3-1_200_b1_sep16_scaffold_9495_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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5618..6019
DNA (402bp) protein (134aa)
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
NifU family SUF system FeS assembly protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6036..6347
DNA (312bp) protein (104aa)
Rieske (2Fe-2S) domain-containing protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
Rieske (2Fe-2S) domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6376..7626
DNA (1251bp) protein (417aa)
cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
cysteine desulfurase (EC:2.8.1.7)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(7669..8442)
DNA (774bp) protein (258aa)
transcription termination factor Rho; K03628 transcription termination factor Rho bin=bin1_lowGC species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
rho; transcription termination factor Rho
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9495_11
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(8583..8858)
DNA (276bp) protein (92aa)
transcription termination factor Rho; K03628 transcription termination factor Rho bin=bin1_lowGC species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcription termination factor Rho
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_9495_12
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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9135..9647
DNA (513bp) protein (171aa)
id=14425459 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying 12 items

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