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PLM3-1_200_b1_sep16_scaffold_9583

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_9583_1
unknown

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1..555
DNA (555bp) protein (185aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_9583_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(627..1484)
DNA (858bp) protein (286aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1738..2025
DNA (288bp) protein (96aa)
histone family protein DNA-binding protein; K05788 integration host factor subunit beta bin=bin1_lowGC species=Sphingopyxis baekryungensis genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA-binding protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2146..2670
DNA (525bp) protein (175aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=DEF_THEYD
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_9583_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(2655..2849)
DNA (195bp) protein (65aa)
50S ribosomal protein L28 Tax=Koribacter versatilis (strain Ellin345) RepID=RL28_KORVE
rpmB; 50S ribosomal protein L28
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_200_b1_sep16_scaffold_9583_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3312..3788
DNA (477bp) protein (159aa)
aspartate transaminase (EC:2.6.1.1) bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aspartate transaminase (EC:2.6.1.1)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3799..4401
DNA (603bp) protein (201aa)
aspartate transaminase (EC:2.6.1.1) bin=bin1_lowGC species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
aspartate transaminase (EC:2.6.1.1)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4830..5588
DNA (759bp) protein (253aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Triose-phosphate isomerase (EC:5.3.1.1)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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5595..6020
DNA (426bp) protein (142aa)
protein translocase subunit secG bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
secG; preprotein translocase subunit SecG
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

6145..6408
DNA (264bp) protein (88aa)
4Fe-4S ferredoxin bin=bin1_lowGC species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
4Fe-4S ferredoxin
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_9583_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6468..6767
DNA (300bp) protein (100aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
endonuclease III (EC:4.2.99.18)
Tax=CSP1_2_Dadabacteria
Displaying 11 items

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