ggKbase home page

PLM3-1_200_b1_sep16_scaffold_11906

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_11906_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] bin=bin1_lowGC species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

303..707
DNA (405bp) protein (135aa)
hypothetical protein bin=bin1_lowGC species=Thermoplasma acidophilum genus=Thermoplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

710..1747
DNA (1038bp) protein (346aa)
ATPase of the MinD/MRP superfamily (mrp-like)(ATP/GTP-binding protein) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
mrp; Mrp protein, an chromosome partitioning ATPase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

1890..2153
DNA (264bp) protein (88aa)
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
chaperone protein dnaj
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

2098..2787
DNA (690bp) protein (230aa)
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
DnaJ-class molecular chaperone with C-terminal Zn finger domain
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_11906_6
unknown

Not on your lists

2784..2909
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_11906_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3102..3398
DNA (297bp) protein (99aa)
hypothetical protein bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3622..5085
DNA (1464bp) protein (488aa)
rfaE bifunctional protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
cytochrome C biogenesis protein CcdA
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_11906_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5132..5386)
DNA (255bp) protein (85aa)
id=14425306 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 9 items

View Taxonomy