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PLM3-1_200_b1_sep16_scaffold_795

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_795_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2..1273)
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX bin=bin1_lowGC species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
ATP-dependent Clp protease, ATP-binding subunit ClpX
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1270..1572)
DNA (303bp) protein (101aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] bin=bin1_lowGC species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
clpP; ATP-dependent Clp protease proteolytic subunit
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1756..3060)
DNA (1305bp) protein (435aa)
trigger factor; K03545 trigger factor bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
trigger factor
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_trna_2
unknown

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comp(3117..3199)
DNA (83bp)
transferRNA Leu
PLM3-1_200_b1_sep16_scaffold_795_trna_1
unknown

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comp(3206..3279)
DNA (74bp)
transferRNA Lys
PLM3-1_200_b1_sep16_scaffold_795_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3636..6269)
DNA (2634bp) protein (878aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
peptidase M16 domain-containing protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6437..7234)
DNA (798bp) protein (266aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
CDP-diacylglycerol/serine O-phosphatidyltransferase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7237..7887)
DNA (651bp) protein (217aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] bin=bin1_lowGC species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
phosphatidylserine decarboxylase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7887..8903)
DNA (1017bp) protein (339aa)
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_8
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(8907..9404)
DNA (498bp) protein (166aa)
acetolactate synthase, small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] bin=bin1_lowGC species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ilvN; acetolactate synthase small subunit (EC:2.2.1.6)
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_795_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9491..11197)
DNA (1707bp) protein (569aa)
acetolactate synthase large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ilvG; acetolactate synthase, large subunit IlgV (EC:2.2.1.6)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11229..11441)
DNA (213bp) protein (71aa)
hypothetical protein; K09794 hypothetical protein bin=bin1_lowGC species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(11446..12129)
DNA (684bp) protein (228aa)
peptidase M22, glycoprotease bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
peptidase M22, glycoprotease
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(12130..13167)
DNA (1038bp) protein (346aa)
twitching motility protein; K02669 twitching motility protein PilT bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
twitching motility protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_795_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists


comp(13176..14201)
DNA (1026bp) protein (342aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
recA protein
Tax=CSP1_2_Dadabacteria
Displaying 15 items

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