ggKbase home page

PLM3-1_200_b1_sep16_scaffold_812

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_812_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

202..3003
DNA (2802bp) protein (934aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_812_2
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3166..4215)
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GDS7_9CYAN
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM3-1_200_b1_sep16_scaffold_812_3

Not on your lists

4523..5179
DNA (657bp) protein (219aa)
Fe-S oxidoreductase Tax=Desulfospira joergensenii RepID=UPI0003B786F0
Uncharacterized protein {ECO:0000313|EMBL:KKK49103.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_812_4
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

5211..6641
DNA (1431bp) protein (477aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DBD0F
ykgF; (Fe-S)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3-1_200_b1_sep16_scaffold_812_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6754..7452
DNA (699bp) protein (233aa)
hypothetical protein Tax=Paenisporosarcina sp. TG-14 RepID=UPI0002F30882
Lactate utilization protein B/C {ECO:0000313|EMBL:ETX00206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
lactate utilization protein B/C
PLM3-1_200_b1_sep16_scaffold_812_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(7627..8346)
DNA (720bp) protein (240aa)
short-chain dehydrogenase/reductase SDR bin=bin1_lowGC species=Microbulbifer agarilyticus genus=Microbulbifer taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
short-chain dehydrogenase/reductase SDR
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_812_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8868..9842
DNA (975bp) protein (325aa)
ATPase BadF/BadG/BcrA/BcrD type Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAJ0_CLOSW
BadF/BadG/BcrA/BcrD type ATPase
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ADL04268.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
PLM3-1_200_b1_sep16_scaffold_812_8
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9843..10397)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Methylohalobius crimeensis RepID=UPI0003B596B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY43645.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM3-1_200_b1_sep16_scaffold_812_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10657..10980
DNA (324bp) protein (108aa)
FmdB family regulatory protein bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
FmdB family regulatory protein
Tax=CSP1_2_Dadabacteria
Displaying 9 items

View Taxonomy