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PLM3-1_200_b1_sep16_scaffold_3761

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_3761_1
unknown

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comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3-1_200_b1_sep16_scaffold_3761_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(162..1250)
DNA (1089bp) protein (363aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] bin=bin1_lowGC species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1610..1900
DNA (291bp) protein (97aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
groES; co-chaperonin GroES
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1937..2242
DNA (306bp) protein (102aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
groEL; molecular chaperone GroEL
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2196..3473
DNA (1278bp) protein (426aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
groEL; molecular chaperone GroEL
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_3761_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(3637..4299)
DNA (663bp) protein (221aa)
phospholactate guanylyltransferase (EC:2.7.7.-); K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
cofC; 2-phospho-L-lactate guanylyltransferase (EC:2.7.7.68)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_7
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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4395..4937
DNA (543bp) protein (181aa)
DNA repair protein RadC; K03630 DNA repair protein RadC bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
DNA repair protein RadC
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_3761_8
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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4894..5058
DNA (165bp) protein (55aa)
DNA repair protein RadC bin=GWF2_Lentisphaerae_50_93 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=CG_Dehalo_01
PLM3-1_200_b1_sep16_scaffold_3761_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5253..5918
DNA (666bp) protein (222aa)
cation efflux protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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6374..6901
DNA (528bp) protein (176aa)
mazF; toxin MazF (EC:3.1.-.-)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490, ECO:0000313|EMBL:CBK42219.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
mRNA interferase Tax=Candidatus Nitrospira defluvii RepID=D8PG32_9BACT
PLM3-1_200_b1_sep16_scaffold_3761_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7711..8346
DNA (636bp) protein (212aa)
id=14425114 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(8368..9732)
DNA (1365bp) protein (455aa)
replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
replicative DNA helicase (EC:3.6.1.-)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9799..10521)
DNA (723bp) protein (241aa)
calcineurin-like phosphoesterase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
calcineurin-like phosphoesterase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10543..11871)
DNA (1329bp) protein (443aa)
glycerate kinase (EC:2.7.1.31); K11529 glycerate 2-kinase [EC:2.7.1.165] bin=bin1_lowGC species=Methanosalsum zhilinae genus=Methanosalsum taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
glycerate kinase (EC:2.7.1.31)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_3761_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11904..12179)
DNA (276bp) protein (92aa)
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] bin=bin1_lowGC species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
nuoE; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
Tax=CSP1_2_Dadabacteria
Displaying 15 items

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