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PLM3-1_200_b1_sep16_scaffold_1101

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1101_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1..561
DNA (561bp) protein (187aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF bin=bin1_lowGC species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin1_lowGC organism_group=Unknown_CP
secF; preprotein translocase subunit SecF
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(634..951)
DNA (318bp) protein (106aa)
id=14426067 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1019..1510)
DNA (492bp) protein (164aa)
carbon starvation protein CstA; K06200 carbon starvation protein bin=bin1_lowGC species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
CstA; carbon starvation protein, membrane protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(1488..2774)
DNA (1287bp) protein (429aa)
carbon starvation protein CstA; K06200 carbon starvation protein bin=bin1_lowGC species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
carbon starvation protein CstA
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_5
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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3176..3682
DNA (507bp) protein (169aa)
hypothetical protein; K09793 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_200_b1_sep16_scaffold_1101_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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3796..4815
DNA (1020bp) protein (340aa)
phenylalanyl-tRNA synthetase, alpha subunit; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
phenylalanyl-tRNA synthetase subunit alpha
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4903..5214
DNA (312bp) protein (104aa)
Uncharacterized conserved protein containing predicted Zn-ribbon like domain Tax=delta proteobacterium MLMS-1 RepID=Q1NNK9_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_200_b1_sep16_scaffold_1101_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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5410..5964
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] bin=bin1_lowGC species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6132..8456
DNA (2325bp) protein (775aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
DNA gyrase subunit B (EC:5.99.1.3)
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8820..9239)
DNA (420bp) protein (140aa)
esterase bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
esterase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(9525..10580)
DNA (1056bp) protein (352aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase bin=bin1_lowGC species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-related flavin-dependent oxidoreductase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10714..10938
DNA (225bp) protein (75aa)
id=14425045 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1101_trna_1
unknown

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11015..11086
DNA (72bp)
transferRNA Val
PLM3-1_200_b1_sep16_scaffold_1101_13
unknown

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comp(11095..11190)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 14 items

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