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PLM3-1_200_b1_sep16_scaffold_1355

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_200_b1_sep16_scaffold_1355_1

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comp(1..132)
DNA (132bp) protein (44aa)
Marine sediment metagenome DNA, contig: S01H4_L04222 {ECO:0000313|EMBL:GAG83397.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NusA antitermination factor; K02600 N utilization substance protein A bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
PLM3-1_200_b1_sep16_scaffold_1355_2

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comp(143..598)
DNA (456bp) protein (152aa)
Marine sediment metagenome DNA, contig: S01H4_L04222 {ECO:0000313|EMBL:GAG83396.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K09748 ribosome maturation factor RimP bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
PLM3-1_200_b1_sep16_scaffold_1355_3
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(892..2910)
DNA (2019bp) protein (673aa)
transglutaminase bin=bin1_lowGC species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transglutaminase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2907..4916)
DNA (2010bp) protein (670aa)
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
uvrB; excinuclease ABC subunit B
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5017..5451)
DNA (435bp) protein (145aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5463..5945)
DNA (483bp) protein (161aa)
putative transmembrane anti-sigma factor bin=bin1_lowGC species=Thermoanaerobacter wiegelii genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(5950..6510)
DNA (561bp) protein (187aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
RNA polymerase subunit sigma-24
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6814..8337
DNA (1524bp) protein (508aa)
EmrB/QacA subfamily drug resistance transporter bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
EmrB/QacA family drug resistance transporter
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_9
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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8436..9893
DNA (1458bp) protein (486aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] bin=bin1_lowGC species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
Tax=CSP1_2_Dadabacteria
PLM3-1_200_b1_sep16_scaffold_1355_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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9841..10323
DNA (483bp) protein (161aa)
RNA methyltransferase, RsmE family; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] bin=bin1_lowGC species=Acetivibrio cellulolyticus genus=Acetivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
16S ribosomal RNA methyltransferase RsmE
Tax=CSP1_2_Dadabacteria
Displaying 10 items

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